Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian7g02037 ATGGGGATGGAGCCAATTTGTGGACAGGCTTATGGAGCAAAGCAATGGAAGCTACTTGGCTTGACACTGCAGAGAACTGTGCTCCTTCTGCTCTCAACATCCATCCCCATCTCATTCATGTGGCTCAACATGAAGAGAATCCTCTTGTGGTCTGGCCAAGACAATGAAATAGCATCAGTGGCTCAAACATTCATCATTTTCTCAATACCTGACCTTTTCCTCCTCTCACTTCTCCACCCTCTGAGAATCTACCTCAGGACTCAGAGAATCACATTGCCATTGACATATTGCTCAACCATCTCAGTTCTTCTCCATGTGCCTTTGAATTTCCTCCTGGTGGTTCATCTCAAGATGGGAATTGCTGGGGTGGCTACTGCAATGGTGTTGACCAACCTCAATCTGATTCTCTTCCTCTCCTCTTTTGTCTACTTCTCTGGTGCATACAAGGCCTCATGGGTTCCCCCAAGCGTGGATTGCATCAAAGGGTGGTCCTCATTGCTGTCACTTGCAGTTCCAACCTGTGTCTCAGTTTGCCTTGAGTGGTGGTGGTATGAGTTCATGATAATGCTATGTGGCCTTTTGGCCAATCCAAAAGCAACCATTGCTTCAATGGGAATCCTTATCCAAACAACATCTTTGGTCTATGTGTTCCCATCATCACTCAGCCTCGGTGTTTCCACAAGAATAGGGAATGAGCTAGGTGCAAACAACCCTGGAAAAGCAAGACTTTCCATGATAGTCTCACTCTTTTGTGCTGTGGCATTAGGCCTTGCAGCCATGCTGTTCACCACCTTGATGAGGCACCAATGGGGCAGATTCTTCACCAATGATCATGAAATTTTGGAACTCACATCACTGGTGCTGCCAATTGCTGGCCTCTGTGAGCTTGGAAACTGCCCACAGACCACAGGCTGTGGAGTCCTAAGGGGCAGTGCAAGACCTGCCATTGGTGCCAACATCAATTTGGGCTCATTTTACTTGGTGGGTATGCCAGTGGCTATCCTTCTGGGCTTTGTGGCCAAAATGGGGTTTGCAGGGCTTTGGCTTGGGTTGCTTGCAGCCCAAGTCTCCTGTGCAGGCCTCATGCTCTATGTGCTTTGCAGAACAGATTGGAATGTAGAAGTAGAAAAAGCCAAGGAACTCACAAAAACAACATCAACAACTACTACCACTTCTTCTGCTGCTGCTACAGCTCCAGATTCTAACTCTAAGTTACCTACACTCACCCCAAAAGAGGCTAACATGAACAACAATGCTCATGCTTGTTGTCTTGAAGAGATAGTTATTACTGCTGCTTCTGATGAGTTTACCAATATTTCTTCACTTGAAACAGATCCACTGATCATTCCCACCACCAGACACACTCAAGTTTAG 1374 0.4665 MGMEPICGQAYGAKQWKLLGLTLQRTVLLLLSTSIPISFMWLNMKRILLWSGQDNEIASVAQTFIIFSIPDLFLLSLLHPLRIYLRTQRITLPLTYCSTISVLLHVPLNFLLVVHLKMGIAGVATAMVLTNLNLILFLSSFVYFSGAYKASWVPPSVDCIKGWSSLLSLAVPTCVSVCLEWWWYEFMIMLCGLLANPKATIASMGILIQTTSLVYVFPSSLSLGVSTRIGNELGANNPGKARLSMIVSLFCAVALGLAAMLFTTLMRHQWGRFFTNDHEILELTSLVLPIAGLCELGNCPQTTGCGVLRGSARPAIGANINLGSFYLVGMPVAILLGFVAKMGFAGLWLGLLAAQVSCAGLMLYVLCRTDWNVEVEKAKELTKTTSTTTTTSSAAATAPDSNSKLPTLTPKEANMNNNAHACCLEEIVITAASDEFTNISSLETDPLIIPTTRHTQV 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian7g02037 457 MobiDBLite consensus disorder prediction 382 410 - -
Vian7g02037 457 Pfam MatE 172 334 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Vian7g02037 457 Pfam MatE 1 111 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Vian7g02037 457 NCBIfam MATE family efflux transporter 1 348 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Vian7g02037 457 PANTHER MULTIDRUG RESISTANCE PROTEIN 2 371 - -
Vian7g02037 457 MobiDBLite consensus disorder prediction 381 410 - -
Vian7g02037 457 CDD MATE_eukaryotic 1 377 IPR045069 GO:0042910|GO:1990961
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian7g02037 Vian-Chr7 33466843 33468216 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian7g02037 K03327 - gmx:100783792 761.911
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian7g02037 7 33466843 33468216 Vian7g02037 7 33466843 33468216 ECH