Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian7g01752 ATGGTGTGGGGACTCTTCCCCGTTGATCCTCTTTCAGGTGAAGATAAGTACTATATTTTCAAAACTGGAATTTACAGAGTTGGTCGAAAAGGTTGTGACGTGATAATCACTAAAGATAAAGGTGTTTCTCGGGTTCATGCAGAAATAGTTGTTAATACAATGAACCTGGTAAATCCTTTATCAAATGAATGTTCTCATTTCTCACGCAACATACATATTAGAGATTGCTCCAAGTATGGGACATTTATTAGCAAAAATGTTGGGCCGAGGAAAAAAGTTCATGAGCTACCAAACAAACAAACACCACTAGAGGATGGTGACTTTGTGTCTTTTGGCACTGGTAGCGCTACCTACAAGTTTTGCCACGTACCCCTCGTTTTTTTCATCTGTTCCTCAAATAAAGATAGGGTAGGTCCTAAGCTTAGTGCAAGTGTCAGGGGAGTGTGTGCTAGTTTTACTCATACCTTAGGTGAAGGGTGCACACATGTACTGGTAGATCAACTCATGCCGTTGAAGAAGGATCTTGTTGATGCTATTGTGGCAAAAAAATCTTGTGTTCTTAATAATTGGCTTGAGGTTTTTGCAGAAAAGAATATTAGCATCGAAATTCCTAGCTGTCATTCATATATTCCAACAGTGTCAGTGGATGGGGAATCTATAAAAATTGCCGACCCCAGATCGCGTGAAGATTGTTTGAAAGGATACACTTTTTTGTTGGAATCTGAGCATTTGTATAAATTTCAGTATCAACTAAAATCTTTATTGGAAGTGGCTGGTGCAAAAGTTGTTTCCTCCGGAGAGTTTTGTTCAATTAGTCAAGATTCAAATTATGGAGAGGATGATCGTGTGGTTTGTGTCATCCCAGAAGGACCAGCATGCAAGTCAAATCTCTTTGTTAAACTGAGTTCCTCACTTAGAGTCAGTGAGATGGATATAATTTGTGCTGCTCTGAGTGGACAGCTAGATATGTCTATTTTGAAATCACCATGCATACTTGTTTCGTCATCATGCTCTACAGATGAGACAATTGTTGCAGATTCAGATACTGAAGTTGAAACAGCCACGTCGGCCCGCTCCACTGAGGCATTCAGCAATGACAATAATAGAAAACATGAAAGTATAGAGGCATCCTCAGATGATGTTTTAACCAGATTGCATGACATTAAACGTGCAAAAACAGAAACATCTTTGGATGGTGCTTCTGTCAGATCACATGCCATCAACTTCGGGAATGATAACGATGGTGTCAAAGTAAAGAAAGACAAGGTTGATGATAATGAAACTGGAAATTCAGATGTTGTTTACAGCCAAAATTTAATTGTTCGAGATACAGACATACGGAATAGCATAAGCAGTTCACCAAACAGCAGTTTTCCAAATTTTAAATGTTTCAGAAAGGCACACACTCAGTCTGGTAATAGCTTTGACAATCTTGTTCCATTTTCAAAATATCCATACAAGGATTCTGACTGTGGGGATGATGAAATGTCTGAGTTAGCGAAGGAGGAGAAAAGGCGAAAGAAAATGGAAGCTGTCGCAGATGACCTATTTAATAATGATAAGGCAAGGAAACGAGCCACAGCTGGTTCACGAGGCACTGTTGGTTCTCTTCGTAGCATTCTTTCTTCATGA 1632 0.3934 MVWGLFPVDPLSGEDKYYIFKTGIYRVGRKGCDVIITKDKGVSRVHAEIVVNTMNLVNPLSNECSHFSRNIHIRDCSKYGTFISKNVGPRKKVHELPNKQTPLEDGDFVSFGTGSATYKFCHVPLVFFICSSNKDRVGPKLSASVRGVCASFTHTLGEGCTHVLVDQLMPLKKDLVDAIVAKKSCVLNNWLEVFAEKNISIEIPSCHSYIPTVSVDGESIKIADPRSREDCLKGYTFLLESEHLYKFQYQLKSLLEVAGAKVVSSGEFCSISQDSNYGEDDRVVCVIPEGPACKSNLFVKLSSSLRVSEMDIICAALSGQLDMSILKSPCILVSSSCSTDETIVADSDTEVETATSARSTEAFSNDNNRKHESIEASSDDVLTRLHDIKRAKTETSLDGASVRSHAINFGNDNDGVKVKKDKVDDNETGNSDVVYSQNLIVRDTDIRNSISSSPNSSFPNFKCFRKAHTQSGNSFDNLVPFSKYPYKDSDCGDDEMSELAKEEKRRKKMEAVADDLFNNDKARKRATAGSRGTVGSLRSILSS 543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian7g01752 543 Gene3D - 4 122 - -
Vian7g01752 543 Coils Coil 499 519 - -
Vian7g01752 543 ProSiteProfiles Forkhead-associated (FHA) domain profile. 25 84 IPR000253 GO:0005515
Vian7g01752 543 MobiDBLite consensus disorder prediction 355 374 - -
Vian7g01752 543 PANTHER NIBRIN-RELATED 401 523 IPR040227 GO:0006302|GO:0007095|GO:0030870
Vian7g01752 543 FunFam Nibrin 5 121 - -
Vian7g01752 543 CDD FHA_NBN 3 122 - -
Vian7g01752 543 MobiDBLite consensus disorder prediction 517 543 - -
Vian7g01752 543 Pfam FHA domain 25 112 IPR000253 GO:0005515
Vian7g01752 543 SUPERFAMILY SMAD/FHA domain 16 128 IPR008984 GO:0005515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian7g01752 K10867 - gmx:100783205 844.728
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian7g01752 7 27474400 27487594 Vian7g01752 7 27474400 27487594 ECH