Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian7g01749 ATGGAACAACTCAAGCCAAGCGCTGCTAACTCTTCTCCTCTCACACCGCTAGGTTTCTTGGACAGAGCCGCCACCATTTACGGCGACGTCCCTTCCATTGTCTACAACCACACAACCTTTACCTGGGCCCAAACCCACCGCCGATGCCTCCAGCTCGCCTCCGCCATCTCCTCCCTCGGAATCCGCCGCGGCAGCGTCGTCTCCGTCGTCGCTCCCAACATCCCCGCCATGTACGAGCTCCAGTTTTCCATCCCCTTCGCCGGTGCTATCCTCAACAACATCAACCTCCGCCTCGACGCCCGCACCATCTCCGTCATCCTCCGCCATGCGAACTCCGCGCTCGTCTTCGTCGACTGCGCCTCACGCGACCTCGTCCTCGAAGCCTTGTCCCTCTTCCCTAAACACCACACTCAACGCCCACTACTGGTTCTCATCGCCGACGACAGTGTCGAAAACGCAGACGTCTCATGCTCCGGTGATTTCGTTGACACATACGAGGGCCTGGTGAGCAAGGGCGATCCGAACTTCGAATGGGTACGGCCTATATCGGAGTGGGACCCGATGATTCTTAACTACACCTCAGGAACGACGTCGTCTCCGAAAGGGGTTGTTCACTCCCACAGAGGAATATTCTTAGTCTCCGTCGACACGCTTATCGATTGGGCTGTTCCCAAGAGACCGATTTATCTCTGGACGCTCCCGATATTCCACGCTAACGGGTGGAGCCTCCCGTGGGGTATCGCTGCCTCGGGCGGCACCAACATCTGCGTCCGCAAGTTTGACGCGGGGATTATTTACTCTCTCATAAAACGCAACCACGTGACACACATGTGCGGCGCACCGGTGGTGCTCAGCATGTTGACAAACTCCCCGGACAACAAACCATTGGAGAGGCCAGTTCATATACTCACGGCGGGAGCGCCGCCGCCAGCAACGGACAGGTCAAAAGATGTGATCATAAGCGGCGGCGAGAACCTGAGCAGCGTGGAGGTGGAGTCGATTTTGTACGGGCACCCGGCGGTGGTGGAGGCGGCGGTGGTGGCGCGACCGCATGAGTATTGGGGAGAGACGCCGTGCGCGTTCCTGAGCTTGAAGGCGGGGTTGAAAGAGAAACCCAGTGAAGATGACATAATAAAGTACTGCAGGGAGAAGATGCCGCATTATATGGTTCCGAAGACAGTGGTTTTCAAGGATGAACTTCCGAAGACATCGACGGGGAAGATCCAGAAGTTTCTCCTGAGGCAGATCGCGAAGGAGATGGGTTCTTCAATGCAAAGTCGAATGTGA 1287 0.5688 MEQLKPSAANSSPLTPLGFLDRAATIYGDVPSIVYNHTTFTWAQTHRRCLQLASAISSLGIRRGSVVSVVAPNIPAMYELQFSIPFAGAILNNINLRLDARTISVILRHANSALVFVDCASRDLVLEALSLFPKHHTQRPLLVLIADDSVENADVSCSGDFVDTYEGLVSKGDPNFEWVRPISEWDPMILNYTSGTTSSPKGVVHSHRGIFLVSVDTLIDWAVPKRPIYLWTLPIFHANGWSLPWGIAASGGTNICVRKFDAGIIYSLIKRNHVTHMCGAPVVLSMLTNSPDNKPLERPVHILTAGAPPPATDRSKDVIISGGENLSSVEVESILYGHPAVVEAAVVARPHEYWGETPCAFLSLKAGLKEKPSEDDIIKYCREKMPHYMVPKTVVFKDELPKTSTGKIQKFLLRQIAKEMGSSMQSRM 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian7g01749 428 SUPERFAMILY Acetyl-CoA synthetase-like 11 311 - -
Vian7g01749 428 Pfam AMP-binding enzyme C-terminal domain 330 407 IPR025110 -
Vian7g01749 428 ProSitePatterns Putative AMP-binding domain signature. 190 201 IPR020845 -
Vian7g01749 428 Gene3D - 319 427 IPR045851 -
Vian7g01749 428 Gene3D - 2 318 IPR042099 -
Vian7g01749 428 Pfam AMP-binding enzyme 21 312 IPR000873 -
Vian7g01749 428 FunFam 2,3-dihydroxybenzoate-AMP ligase 316 421 - -
Vian7g01749 428 SUPERFAMILY Acetyl-CoA synthetase-like 312 419 - -
Vian7g01749 428 PANTHER ACYL-ACTIVATING ENZYME 1 311 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian7g01749 Vian-Chr7 27427689 27429344 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian7g01749 313 420 EF-hand Containing Proteins AT1G21540 61.818 1.31e-38 144
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian7g01749 - - mus:103980855 537.724
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian7g01749 7 27427689 27429344 Vian7g01749 7 27427689 27429344 ECH