Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian7g01748 ATGGGAGTGCTTTCCAATATGATCGACCGTGAAAATCTGAAACTCGGTGATCACATTTACTCTTGGAGGCAAGCCTACATCTATGCGCACCACGGAATATATGTTGGCTGTGGAATGGTGGTCCACTTTACCAGAGGAGCAGGTCAAGAAATTGGAACAGGGACTGTGTTGGACAATTTCCTTTTAAGTTCATCTCCCACTCATTCTATTGACACTCCATGCCCAAGATGTGCTAACCAAACTAGGACCGATGGTGTCTTATGTTCCTGTTTGGATTGTTTTCTTTCTGGTGGTAATCTATACATCTTTGAGTATGGGGTATCACCTGCATTTTTTCTAGCCAAAGCTCGAGGAGGTACCTGCACTCTTGCTCCATCTGATCCAGTTGAAGATGTCCTTCATCGGTCTTCATTTCTTCTCGACAATGGGTTTGGTGGCTACAATGTTTTCAAGAATAACTGCGAAGACTTTGCAATTTACTGCAAGACAGGCCTGCTTGTGTCCACAAACATCAGTGTTGGTCGCAGTGGGCAATTGGCATCTTACATATCTGCTGCTAGTACTGTAGTTTCCACACCGCTTCGTTTTATGACCACCAGTTTCAGTGGTTTGGCATTGGTTAGTGTTGGCATGTACTGTGCTGGAAGGTTGATGTCTGATATTGGAGTACGCCGTGATGTGCTGAAAGTTCCAGTGGAAAGGCTTATAGCTACACCTGGCCAGGATATATCACCTGGCCTGGATATATCAGAGAGGACAACTGAGATGGCCAAGGAAGATTAA 783 0.4496 MGVLSNMIDRENLKLGDHIYSWRQAYIYAHHGIYVGCGMVVHFTRGAGQEIGTGTVLDNFLLSSSPTHSIDTPCPRCANQTRTDGVLCSCLDCFLSGGNLYIFEYGVSPAFFLAKARGGTCTLAPSDPVEDVLHRSSFLLDNGFGGYNVFKNNCEDFAIYCKTGLLVSTNISVGRSGQLASYISAASTVVSTPLRFMTTSFSGLALVSVGMYCAGRLMSDIGVRRDVLKVPVERLIATPGQDISPGLDISERTTEMAKED 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian7g01748 260 PANTHER OS05G0310600 PROTEIN 1 237 - -
Vian7g01748 260 Gene3D endopeptidase domain like (from Nostoc punctiforme) 4 173 - -
Vian7g01748 260 ProSiteProfiles LRAT domain profile. 20 170 IPR007053 -
Vian7g01748 260 Pfam Lecithin retinol acyltransferase 12 166 IPR007053 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian7g01748 Vian-Chr7 27378543 27381086 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian7g01748 - - gmx:100784269 456.062
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian7g01748 7 27378543 27381086 Vian7g01748 7 27378543 27381086 ECH