Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian7g01720 ATGGAGATACAGACATGTGGCAAGCCAATTGACTCCTTGCTAGAAAAGGTTCTGTGCATGAATATTTTGTCATCTGATTACTTTAAGGAGCTCTATCGATTAAAAACGTATCATGAAGTTATTGATGAGATCTATAATCAAGTTGATCATGTGGAGCCGTGGATGACTGGCAATTGTCGCGGCCCTTCTACTGCTTTCTGTCTTCTTTACAAATTTTTTACGATGAAGCTCACTGTCAAGCAAATGCACGGGCTGTTGAAACACCCTGATTCTCCTTACATTAGAGCGGTTGGGTTTCTCTATCTGAGATATTGTGGAGACCCAAAGACACTATGGAGTTGGTTTGAACCATATATAAAAGACGAGGAGGAATTTTCTCCTGGATCTAATGGTCGAATGACTACAATGGGTGTATACATCCGTGATTTGCTACTTGGACAGATTATTAATGTACAACACAATTGCGAGGGAAAAAATCATTTGACTCGAGTAAAGGCTAGTCAAACTGAGAATTCTCTCTTCAGAGCTTTCCTACCAGAGATGCATCACGAGACTGCAAATGCAGATATATCCCTCACCTATTACTTCGACACACTGTTTCCTCGCATCCCCGTTCCTGTATTGCGGCAGGTTGTGTCTAATCTTGAAAAGTTGAAGCTCCCCACTACACATTCGGGTTCGACTGGGGAATCTACCCGTCATGGTTCTGATGATACTGCCCGCAGACCACCTTCGGTTAAAGCTGCTCTTTCAGTCTCTTTTGGTCAGCGAGCTCCACATCGTGCCTCCACAAGGGATTCTTCACCTATTCGCCGTACATTACCTTCTCATGAAAGAAATGGCAGTGATGACATAAGAAGATCTCCAAGTAGTCGCCGCAGCCAAAGCCGGGAATATCCTGATAGGGATAGGGATCGTGAACGGTCACGATCCAGAGATAGGGATAGGGATCATGATAGGGACCGGGACAGGGAAAGGGAGAGGGACAGGGATCGAGAACGTGATAGGGACAGATACCGTGATAGAGATAGAAACAGGGAGTGGGAGCGTGATCGAGACCGGGAAAGATACAGGGATCGTGACTCAGACCGAGATCAGGAGAGGGACAGAATCCGAAGGGATAAGGAGCGGGAAAGAGAGAGGAGTTATGATTATGATAGGAGGTCTAAGCACACAGAAAGAGAAAGCAGCCGGGATTATGACAATGGGAGCCGGCACTATCGTAAGAGTCGGAGTAGAAGTAGAAGCAGGAGTAGGAGTCAGAGCCAGCAAGCCGGCACTGCTCGTCATGAATCACGGTCTAGTCCACCAAGAGATGGGAGTAAAAGAACTTCTGCATCCAGTAATCTAGCTAAACTTAAAGATATGTATGGTGATTTAGGGGATAATAAAGGAGAAATCCGCATGGAAAAAATTCCTAGAAAGGATAGTGGAGGGGAAGAGGTTATCAGACTTGGCGGTTCTACTTGGAAGTATTGA 1479 0.455 MEIQTCGKPIDSLLEKVLCMNILSSDYFKELYRLKTYHEVIDEIYNQVDHVEPWMTGNCRGPSTAFCLLYKFFTMKLTVKQMHGLLKHPDSPYIRAVGFLYLRYCGDPKTLWSWFEPYIKDEEEFSPGSNGRMTTMGVYIRDLLLGQIINVQHNCEGKNHLTRVKASQTENSLFRAFLPEMHHETANADISLTYYFDTLFPRIPVPVLRQVVSNLEKLKLPTTHSGSTGESTRHGSDDTARRPPSVKAALSVSFGQRAPHRASTRDSSPIRRTLPSHERNGSDDIRRSPSSRRSQSREYPDRDRDRERSRSRDRDRDHDRDRDRERERDRDRERDRDRYRDRDRNREWERDRDRERYRDRDSDRDQERDRIRRDKERERERSYDYDRRSKHTERESSRDYDNGSRHYRKSRSRSRSRSRSQSQQAGTARHESRSSPPRDGSKRTSASSNLAKLKDMYGDLGDNKGEIRMEKIPRKDSGGEEVIRLGGSTWKY 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian7g01720 492 Pfam PRP38 family 11 146 IPR005037 -
Vian7g01720 492 MobiDBLite consensus disorder prediction 264 407 - -
Vian7g01720 492 MobiDBLite consensus disorder prediction 417 431 - -
Vian7g01720 492 Coils Coil 492 492 - -
Vian7g01720 492 MobiDBLite consensus disorder prediction 473 492 - -
Vian7g01720 492 PANTHER UNCHARACTERIZED 11 367 IPR005037 -
Vian7g01720 492 MobiDBLite consensus disorder prediction 221 465 - -
Vian7g01720 492 Pfam Pre-mRNA-splicing factor 38-associated hydrophilic C-term 233 318 IPR024767 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian7g01720 K12850 - gmx:100788237 468.388
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian7g01720 7 26990378 26995498 Vian7g01720 7 26990378 26995498 ECH