Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian7g01672 ATGGGGAACACCATAGGAAGGAGTAGAAAGGCCAAGGTCATGAAGGTCGATGGAGAAACGTTGAAGTTCAAAACTCCGGCCAGAGCCAACGACGTCGTCAAGGACTACCCCGGCCACGTTCTGCTCGACTCCGAAGCGGTCAAACATTTCGGCCTTCGGGCCAAGCCCCTTGAGCCTCACCACGAATTGAAGCCCAGGAAAATCTACTTCCTCGTTGAATTACCCAAGATTCAACCCGAAGACGATAAAACGGCGCTGCATAGGAGGGTGCGATCCAGTGGTATCCGCGGCATGAACGCTAAGGATAGACTCGAGCTCTTGATGCTCTCCAAACGCTCCGTGTCGGACCTCGCCCTCGTTAGGCCCAACTCCAATCTGGGCTCTGATGGGCCCATGAGGGTTAAGATGAGGCTCCCCAAGGCCCAGTTGGACAAGCTCATGGAGGAGAGCACCGACGGGTCCGACGTGGCGGAGAAAATCATAAGTTTGTACATGGGAAACAATGCCGGCGAGGCCGCCGGCAGTGCTGCGGCAGAGGACGGTGGCGCGAGGACGCTGCACCATCACACTCACAAACCACGTGGGAAACGAGTGAGTTTTAGCCCCGTGGAAAATGAAGAAAATCGCGTGGAAGCAACTTCTCAATAG 648 0.5556 MGNTIGRSRKAKVMKVDGETLKFKTPARANDVVKDYPGHVLLDSEAVKHFGLRAKPLEPHHELKPRKIYFLVELPKIQPEDDKTALHRRVRSSGIRGMNAKDRLELLMLSKRSVSDLALVRPNSNLGSDGPMRVKMRLPKAQLDKLMEESTDGSDVAEKIISLYMGNNAGEAAGSAAAEDGGARTLHHHTHKPRGKRVSFSPVENEENRVEATSQ 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian7g01672 215 Pfam PADRE domain 1 188 IPR025322 -
Vian7g01672 215 PANTHER PLASTID MOVEMENT IMPAIRED PROTEIN-RELATED 1 202 - -
Vian7g01672 215 MobiDBLite consensus disorder prediction 173 215 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian7g01672 Vian-Chr7 26192092 26193889 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian7g01672 - - vra:106763161 387.882
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian7g01672 7 26192092 26193889 Vian7g01672 7 26192092 26193889 ECH
Vian2g02645 2 47271752 47274753 Vian7g01672 7 26192092 26193889 ECH
Vian7g01672 7 26192092 26193889 Vian2g02645 2 47271752 47274753 ECH
Vian2g02645 2 47271752 47274753 Vian7g01672 7 26192092 26193889 PCT