Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian7g01217 ATGTCCGCGGCTTCTTTGGGATCGAACAATATTGAAGGACGGGTGAATGGCCGCTTGAGAGGCTCGGAGTCGGCTTTGGCGAAGGACCTTAGAGTTTCTAATTGCGAGGCTAAGGAGGTCGCCATTGTTAGGGCAGACACTGATATGGAACAACCAAAACACAAACTTCTTCTGATTCTAACGCTTCTTTTTTCAACCGTCACGGTTGAATCTGAATACCTTCGCCCTCTTCCTCGTAAAACCTTAACCATCCCACTGTATTCAATTTCCAAGGCTCACTCCTCTTATCCTCAACAGGTACACATTTCTTTGGCAGGAGAGAAGCACATCAGAGTTACCTGGATAACCGATGATAAACATTCACCCTCGTATGTAGAATACGGAACATTACCTGGGAGATATGACTCAATTGCTGAAGGAGAGTTCACCTCTTATAACTATATGTTATATACCTCAGGAACGATACATCATGTTGTAATTGGACCTTTGGAAGACAATACTGTGTACTTTTACCGTTGTGGGGGAAAAGGTCCTGATTTCCAGCTCAAAACCCCTCCAAACCAATTTCCAATTGTTTTTGCTGTGGCTGGCGATCTTGGTCAGACTGGCTGGACTAAATCAACACTGGCTCACATTGACCAATCTCAATATGATGTCTACCTGCTTCCAGGAGACCTTTCATATGCTGATTGTATGCAGCATCTGTGGGACAGTTTTGGTGAACTAGTGGAGCCGCTTGCTAGTACAAGGCCATGGATGGTGACAGAGGGCAACCATGAAGAAGAGAACATACTCTTGTTAACGGACAATTTTGTGTCCTATAATTCCAGATGGAAAATGCCATTTGAGGAAAGTGGATCAACTTCAAATCTCTATTATTCTTTTGAAGTTGCTGGTGTCCACGTTATCATGCTTGGCTCCTATGAAGATTATGATGTGTACTCTGAACAATATAGATGGCTAAAGGAAGATCTGTCAAAGGTTGATAGGGAAAGGACACCTTGGTTGCTTGTGTCATTTCATATACCGTGGTATAATAGTAACAAGGCCCATCAAGGTGCAGGGGATGATATGATGGCAGCTATTGAGCCGTTGCTTTATGCCGCTAGTGTTGATTTAGTTATTGCTGGTCATGTTCACGCTTACGAACGTTCGGCTATATTTAGGTATATAAACCCACAGCCAAAGTGGTCAGAATTCCGCGAAGCCAGTTTTGGTCACGGTGAGCTGAAGTTTGTAAACTCCACTCATGCCCTCTGGAGTTGGCACAGGAACGATGATGACAATTCAGTAAAAGTTGATGATATCTGGATAAACTCTTTGGTCAGCTCGGGATGCGTTGATCAGAAGACACATGAACTCAGAAGTACACTTATGATACCCTAA 1386 0.4358 MSAASLGSNNIEGRVNGRLRGSESALAKDLRVSNCEAKEVAIVRADTDMEQPKHKLLLILTLLFSTVTVESEYLRPLPRKTLTIPLYSISKAHSSYPQQVHISLAGEKHIRVTWITDDKHSPSYVEYGTLPGRYDSIAEGEFTSYNYMLYTSGTIHHVVIGPLEDNTVYFYRCGGKGPDFQLKTPPNQFPIVFAVAGDLGQTGWTKSTLAHIDQSQYDVYLLPGDLSYADCMQHLWDSFGELVEPLASTRPWMVTEGNHEEENILLLTDNFVSYNSRWKMPFEESGSTSNLYYSFEVAGVHVIMLGSYEDYDVYSEQYRWLKEDLSKVDRERTPWLLVSFHIPWYNSNKAHQGAGDDMMAAIEPLLYAASVDLVIAGHVHAYERSAIFRYINPQPKWSEFREASFGHGELKFVNSTHALWSWHRNDDDNSVKVDDIWINSLVSSGCVDQKTHELRSTLMIP 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian7g01217 461 CDD MPP_PAPs 188 440 IPR041792 -
Vian7g01217 461 Gene3D - 96 187 - -
Vian7g01217 461 PANTHER ACID PHOSPHATASE RELATED 61 439 IPR039331 GO:0003993
Vian7g01217 461 Pfam Iron/zinc purple acid phosphatase-like protein C 381 431 IPR025733 -
Vian7g01217 461 Pfam Calcineurin-like phosphoesterase 193 382 IPR004843 GO:0016787
Vian7g01217 461 SUPERFAMILY Metallo-dependent phosphatases 191 427 IPR029052 -
Vian7g01217 461 Gene3D - 188 448 IPR029052 -
Vian7g01217 461 Pfam Purple acid Phosphatase, N-terminal domain 97 177 IPR015914 GO:0003993|GO:0046872
Vian7g01217 461 SUPERFAMILY Purple acid phosphatase, N-terminal domain 87 186 IPR008963 GO:0003993|GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian7g01217 Vian-Chr7 20415146 20419488 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian7g01217 97 384 Miscellaneous Gene Families AT2G03450 26.648 3.38e-22 97.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian7g01217 K22390 - gmx:100790529 747.658
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian7g01217 7 20415146 20419488 Vian7g01217 7 20415146 20419488 ECH