Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian7g01194 ATGGAGGATATGGACGAGATTGACGCGGTTCCTCAGATTTGTTATGTCAATAGAATTCAAAGCGAGGGATCAACGGCAGGGGGCATGGCCTTGTCTGTGCCGGTTTATAGTGCTTCTGTCTTACCAGTTACTAGAAATGTCAAGTTTAGGAAAAATGAGTTTCAATTTCACGACGTGATTTCTATTAAACTAGAACTTGTGTTTATGTTGCGCTGTAGCAAGTCTTTTGGGTTTTATAATGCATTGCAAGGTGATACGGAGGTTTACATGGCTTGCATACTAAATGGTCATAGAATAGGAATTTCTTATTATGATTCCACCCTTCGCCAACTTTATGTACTTGAAGTTTGGGATGATGGTGACAAAGGTTTTCCAGTTATTGATCTGGTGAAATATCAAGCCAACCCTTTGGTTATTTACACAAGCACTAAAAGTGAAGAATCCTTCTTGTCTGCTCTGCAACAAAAGGATGGAGTAGCTGAGTATCCTGCAGTAAAGCTTGTTAAAAGTTCAATATTCAGCTACGAGCAAGCATGGCATAGATTAATTTACCTGCGAGTGGCGGGGATGGATGATGGATTAAATGTGAAGGAGAGGATTTACTATCTGAGTTCCATGATGGACATGGGAAGTGAAGTACAGGTTCGTGCTAGTGGTGGTCTTCTTGCAATACTAGAGAGTGAAAGGATTGTAGATACTCTTGAACAGAAAGAATCTGGAAATACATCAATTTCAATTGATTCTGTTGCAGAAATTTCATTAAATAACTTTCTCAAACTTGATGCAGCAGCTCATGAAGCATTACAAATATTCCAAATAGACAAGCACCCAAGCCATATGGGAATTGGTAGAGCAAAAGAAGGGTTTTCAGTATTTGGAATGATGAATAAGTGTGTGACTCCGATGGGTAGACGTCTTTTGAGAAATTGGTTCTTAAGGCCTGTTCTTGATCTTGAAGTGCTGAACTACCGTTTAAATTCTGTATCCTTCTATAGTCGAATATCTTTTTTTCTATGCTCAGAAGAAATTGTTGCTTCATTACGGGAAACCTTGAAATCCGTGAAGGATATACCCCACTTGCTGAAGAGTATTTGTGCGCTGTTGCATGTAAACAAGATTTTTGAAGTTGGAATTTCCGAAGACCTTCGTGAAGAGTTGAAGTATTTAAACTTGGACATTGTCGAGAAGGCTAGCTCATGCATAACGTCAGAACTTGGTTATGTTTATGAACTGCATCTGATTTTCGGAACTGGTAGAGTAATTGGCGTTATTGATTTAAATAGAACTAAAGAGAAAGGTTATGCGACGGTTGTGAAGGAAGGTTTCTGTGACGAGTTAGATGAGCTGAGGCAAATATATGAGGAACTGCCGGAATTTCTGGAAGAGGTTTCATCCTTGGAATTGGCTCAACATCCCGGTCTATGCAAGGACAAGGGTGTTCCTTGCATTGTTTATATACAGCAAATAGGTTATTTAATGTGTATCTTTGAAGAAAAACCTGAAGAAACCTCTCTGGAGACACTTGTAGATTGGGAATACGCATTTTGTGACACAGATGGAGAGACAAAAAGATACTTTTATCGTACGCCAAAGACACGAGAATTGGATAGTCTGCTTGGTGATATCCATCATAAAATTCTAGATATGGAGAGGGCAATCACCAGAGATTTGTTTTCGCGTATATTGCTGTTCCAAACCCTTTTGATAAAGGTGGCAACTTTTGCAGCTGAACTGGATTGCTTTCTGTCAATGGCATTGGTTGCACGGCAGAACAACTACGTCAGGCCTTCATTGACTGAAGAAAATTTGCTTGATATAAAAAATGGAAGGCATGTTTTGCAGGAAATGACGATTGCTATAATTGTTTTTCTCTCCCACATTGGTAGTTTTGTGCCCGCCGATGCAGCAACTGTGGGTCTAACAGATAGCAGGCTTATGACAGCTGAACAATCGACATTTATGATTGATCTACATCAAGTAGGGATGATGCTCAGGATGCTACTATCTTCCATCACTCGTTTGTCTTAG 2028 0.3964 MEDMDEIDAVPQICYVNRIQSEGSTAGGMALSVPVYSASVLPVTRNVKFRKNEFQFHDVISIKLELVFMLRCSKSFGFYNALQGDTEVYMACILNGHRIGISYYDSTLRQLYVLEVWDDGDKGFPVIDLVKYQANPLVIYTSTKSEESFLSALQQKDGVAEYPAVKLVKSSIFSYEQAWHRLIYLRVAGMDDGLNVKERIYYLSSMMDMGSEVQVRASGGLLAILESERIVDTLEQKESGNTSISIDSVAEISLNNFLKLDAAAHEALQIFQIDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPVLDLEVLNYRLNSVSFYSRISFFLCSEEIVASLRETLKSVKDIPHLLKSICALLHVNKIFEVGISEDLREELKYLNLDIVEKASSCITSELGYVYELHLIFGTGRVIGVIDLNRTKEKGYATVVKEGFCDELDELRQIYEELPEFLEEVSSLELAQHPGLCKDKGVPCIVYIQQIGYLMCIFEEKPEETSLETLVDWEYAFCDTDGETKRYFYRTPKTRELDSLLGDIHHKILDMERAITRDLFSRILLFQTLLIKVATFAAELDCFLSMALVARQNNYVRPSLTEENLLDIKNGRHVLQEMTIAIIVFLSHIGSFVPADAATVGLTDSRLMTAEQSTFMIDLHQVGMMLRMLLSSITRLS 675
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian7g01194 675 SMART DNAend 286 617 IPR007696 GO:0005524|GO:0006298|GO:0030983
Vian7g01194 675 Pfam MutS domain III 265 585 IPR007696 GO:0005524|GO:0006298|GO:0030983
Vian7g01194 675 PANTHER DNA MISMATCH REPAIR PROTEIN MUTS FAMILY MEMBER 617 665 IPR045076 GO:0005524|GO:0006298|GO:0030983|GO:0140664
Vian7g01194 675 SUPERFAMILY DNA repair protein MutS, domain III 261 592 IPR036187 -
Vian7g01194 675 Gene3D - 616 672 IPR027417 -
Vian7g01194 675 PIRSF Msh6 613 668 IPR017261 GO:0006298|GO:0030983
Vian7g01194 675 PIRSF Msh6 72 615 IPR017261 GO:0006298|GO:0030983
Vian7g01194 675 Gene3D - 258 477 - -
Vian7g01194 675 Pfam MutS family domain IV 441 543 IPR007861 GO:0005524|GO:0006298|GO:0030983
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian7g01194 K08741 - gmx:100794332 1003.82
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian7g01194 7 20206246 20217582 Vian7g01194 7 20206246 20217582 ECH