Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian7g01183 ATGCCTTCTTCACCCTTATTGCCATTAACGATCTTGACACTGACCCTTCTCTCCCTTACCATCGGTGCAAATGCTCAACACTGCAGTGAAGCATTCTTCAAACTTGCAGAACAAAAGAACATCTCAGACTGCAAGAGATTACGCACTCTGGGGGCCGAGTTTGCATGGAAACTCCACGGCAACGGTTCTCACAACTCCACCGTCGTTGACATCTTGTTCGGCGCCACACTCAATGCCCCACAGGGGTGGATAGGCTGGGGTGTCAACCCCGGAAGAAGACCAGAGATGGTTGGGACCAAAGCCATCGTAGCCGTTAAACGCTCCGATGGAACGTGGCTTTTGGACACATACAACATCACCAAAGAGATCAGAAACGGGTGCAATCTTCTGCCATCGAAAATCGGAATCGTTTTGGATATGTCGGCTGAGCGAGATCTGGACAACTTGCACACCATGCATGTGAGATTGAACCTTTCTTCTCAAGCCTATAACGTTACGAGGTTGAACCATGTCTGGCAAGTTGGCTATGATATTGAAGGTGACCGTCCCCTTGGACACCCCAAAACTCTCCGCAACGTCGACAGCACAGAGGTCATCGACTTGACCGACAGCAACGGTCGTAGCACCGGACAGTACCGGAGTTATCTTAGAACGATACATGGAGTCCTAAACATTATAGGATGGGGAACACTGTTGCCGATTGGAATTATAATTGCAAGGTACTTTCGGGTGTTTCCTTTCAAATGCGACCCACTGTGGTTTAACCTGCACATCGGTTGCCAATTAACTGGTTTTCTGGTTGGCACCACCGGATGGGCTATTGGACTGAGCCTCGGCCATTCTTCCAGATACTACACCTTCCACGATCATCGAACCTATGGCATTCTCATATTCACCTTTAGCACAATCCAGATGTTGGCGTTTCGGTTGAAGCCAAAGGTGACGGATGATTACCGGAAATATTGGAACATGTACCATCATTTTCTTGGTTATGGGCTGCTGGCTATCATATTCATAAACATATTCAAAGGAATTCGGATATTGGAAGGAGGTGATGCATGGAAGTGGGGGTACGTTGCAGATCTTGCTTTTCTGGGTGCCATCGCTTTTGGTTTGGAGGTTTACACGTGGATTCACTTCTTTGTGTTGAAGCAGAAACAAAATGCGAAGAAAAACGATAACGAAAAGAAAAAAAGTGAGAACCAGCAGCCACCAAAAGTGCCTGCCTAG 1230 0.4748 MPSSPLLPLTILTLTLLSLTIGANAQHCSEAFFKLAEQKNISDCKRLRTLGAEFAWKLHGNGSHNSTVVDILFGATLNAPQGWIGWGVNPGRRPEMVGTKAIVAVKRSDGTWLLDTYNITKEIRNGCNLLPSKIGIVLDMSAERDLDNLHTMHVRLNLSSQAYNVTRLNHVWQVGYDIEGDRPLGHPKTLRNVDSTEVIDLTDSNGRSTGQYRSYLRTIHGVLNIIGWGTLLPIGIIIARYFRVFPFKCDPLWFNLHIGCQLTGFLVGTTGWAIGLSLGHSSRYYTFHDHRTYGILIFTFSTIQMLAFRLKPKVTDDYRKYWNMYHHFLGYGLLAIIFINIFKGIRILEGGDAWKWGYVADLAFLGAIAFGLEVYTWIHFFVLKQKQNAKKNDNEKKKSENQQPPKVPA 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian7g01183 409 Gene3D - 202 392 - -
Vian7g01183 409 ProSiteProfiles Cytochrome b561 domain profile. 184 381 IPR006593 -
Vian7g01183 409 Pfam Protein of unknown function (DUF568) 96 201 IPR045265 -
Vian7g01183 409 Coils Coil 383 403 - -
Vian7g01183 409 ProSiteProfiles DOMON domain profile. 50 175 IPR005018 -
Vian7g01183 409 MobiDBLite consensus disorder prediction 388 402 - -
Vian7g01183 409 PIRSF UCP037471 3 407 IPR017214 -
Vian7g01183 409 SMART 561_7 219 345 IPR006593 -
Vian7g01183 409 MobiDBLite consensus disorder prediction 388 409 - -
Vian7g01183 409 CDD Cyt_b561_FRRS1_like 194 374 - -
Vian7g01183 409 PANTHER CYTOCHROME B561 AND DOMON DOMAIN-CONTAINING PROTEIN 12 394 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian7g01183 Vian-Chr7 20132055 20133466 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian7g01183 - - gmx:100791697 602.823
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian7g01183 7 20132055 20133466 Vian7g01183 7 20132055 20133466 ECH