Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian7g01161 ATGACAATGTCTTCCATCGACGGTGTCATGCTAGCTTGTAACCCTAATGGGAGCATTAAGGTAATGGTATATGAAGACAATTCAGATAAGTTGAAGAAAGAAAATATTTATAAATTACCTAGTTGTAGTTGCATTGGTGAAATCAATACCATCAAAATCTCTGCCTCCCACCTTGTACACTTAAATATCTCACATTTCAAAATATATATTGATAACTTAATTACAATAGAATATTCTCCTTTTACTAGAATGCAAACTTTTGACTTAATATTCCCGGTGATTATTCCTTATTTTATATGTCTTATTCAATATAGAACTCCGACGAAGGATCGATCGCGGCTGGCCGCGTCACCATCGTTCTCGCCGGAGTTCGTTTCAACGGAAAGGATTGTTATAATGTTTGTAGATGAAACGTGTGTAATGTATGCAGCAGAATATTCTCAGCTGCTTCTTCCTCTTCCTCAGTCGCAAGTACATATCACTGAACATTTACTTCTATATATGCTGCAAATTATTGTTTCAGAGGATGGTATGTTGTCTTTGTATTTTGAAGGCACATCAGAATATGATGTGATTGTTGATGTTGCACCAGAAATCAAATGGATTCCTGATAATAATGCATACAAAAATTTAAAGATTGTTGTTGAGATAGACAGTGATATAGATGCTCAAATAGCATCTGAACAAGAATTTAAAAGGCGTTACAAGTCCATTGGTGCACTGAAAGTGGTTACTGATAGAGGGTTACAGGTGGGTGATATTGCTGTTCTTGACATCTCAGCAACAACCATTGATCAAGATGAATCAAATGTTAAAACTATTCCTTCAGCTGAAAGTAAAGGCTTTAATTTTGATACAGAGGACGGAGACAAGGTATTACCAGGTTTCCTTGATTCAATAATTGGAATTCAACGAGGTGAATCAAAGTCTTTTCCTCTTGTATTTCCTGAAACATGGAACCAGGAAAATCTTCGAGGTGTTCATGCTCAGTTTAATGTTGAATGCAAAGAACTTTTTTACAGAGATTTGCCAGAACTGGATGATTCTATTGCTGATAAGCTTCTCCCTGGATGCAGCACAGTGGAGCAGGTCAAAGACTTATTGTTACAGAGATGCCTAGAGGTGGAGCAAACAGCTCGAGAACAAGCAACTGATAATGCTATCTTAGATCAGATTTCTAAGATGGTTGAAGTTGATATACCTCAATCCTTGTTTGAGGAACAAGGTAGGCAGCTTTATGGAGCCAACCTATTAGAAATACAGGCAAAAATGAAACTAAGTGAGCAACAACTGGCATCTCTCTCAAGTCCAAAGGCTGTGAACCAATATCTTGAGCATCAGAAGGAAAATATAACAAATTTGATAAAACAGAATCTGGCAGTGGGTGATATATATAGGCGTGAAAATCTGCAGTTTGCTACCGAGGATCTCGTCAAAGAGGTTGAGAATTCCATTGCTGAATTCAAACGTCAAAATCAAGAATATGATGAGGAACGGGTGAAGGATCAGGTTCAAGAAATACTAGAAGGAGCTAAAGTGCTTGAATGGTTGAGAGAACATGCAGAGATTCAATACATAACTAGATGA 1587 0.3724 MTMSSIDGVMLACNPNGSIKVMVYEDNSDKLKKENIYKLPSCSCIGEINTIKISASHLVHLNISHFKIYIDNLITIEYSPFTRMQTFDLIFPVIIPYFICLIQYRTPTKDRSRLAASPSFSPEFVSTERIVIMFVDETCVMYAAEYSQLLLPLPQSQVHITEHLLLYMLQIIVSEDGMLSLYFEGTSEYDVIVDVAPEIKWIPDNNAYKNLKIVVEIDSDIDAQIASEQEFKRRYKSIGALKVVTDRGLQVGDIAVLDISATTIDQDESNVKTIPSAESKGFNFDTEDGDKVLPGFLDSIIGIQRGESKSFPLVFPETWNQENLRGVHAQFNVECKELFYRDLPELDDSIADKLLPGCSTVEQVKDLLLQRCLEVEQTAREQATDNAILDQISKMVEVDIPQSLFEEQGRQLYGANLLEIQAKMKLSEQQLASLSSPKAVNQYLEHQKENITNLIKQNLAVGDIYRRENLQFATEDLVKEVENSIAEFKRQNQEYDEERVKDQVQEILEGAKVLEWLREHAEIQYITR 528
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian7g01161 528 FunFam Chloroplast trigger factor 322 523 - -
Vian7g01161 528 SUPERFAMILY FKBP-like 242 347 - -
Vian7g01161 528 Gene3D - 237 344 IPR046357 GO:0003755
Vian7g01161 528 FunFam Trigger factor 242 344 - -
Vian7g01161 528 Coils Coil 478 498 - -
Vian7g01161 528 Gene3D - 207 523 IPR037041 GO:0006457|GO:0015031
Vian7g01161 528 PANTHER TRIGGER FACTOR CHAPERONE AND PEPTIDYL-PROLYL CIS/TRANS ISOMERASE 188 510 IPR005215 GO:0015031
Vian7g01161 528 SUPERFAMILY Triger factor/SurA peptide-binding domain-like 346 524 IPR027304 -
Vian7g01161 528 Pfam Bacterial trigger factor protein (TF) C-terminus 360 517 IPR008880 GO:0006457|GO:0015031
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian7g01161 Vian-Chr7 19884969 19895291 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian7g01161 K03545 - gmx:100812597 643.269
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian7g01161 7 19884969 19895291 Vian7g01161 7 19884969 19895291 ECH