Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian7g01159 ATGGCCAACGAAAACGAACCCGCGAAGCTGCTGTTACCATATCTTCAACGCGCCGATGAATTGCAAAAGCACGAACCTCTCGTCGCTTATTACTGTCGATTATATGCGATGGAACGGGGGTTGAAGATTCCGCAAAGTGAGCGCACAAAGACCACTAATGCTCTTCTTGTCTCGCTCATGAAGCAGCTTGAGAAGGATAAAAAGTCCATCCAGATAGGGCCTGAGGACAATTTATATCTCGAGGGTTTTGCTTTGAATGTGTTTGGAAAGGCAGACAAACAAGATCGTGCTGGAAGAGCAGATTTGAATACAGCGAAAACATTTTATGCTGCCAGCATCTTTTTTGAGATTCTTAATCAATTTGGAGCAGTTCAGCCTGATCTGGAGCAGAAACAGAAATATGCGGTGTGGAAAGCAGCTGATATAAGAAAAGCTTTGAAAGAAGGAAGAAAGCCCACAGCTGGTCCGCCTGCTGGTGATGAGGATCTGTCAATTCCATTCAGTTCTTCAAGTGATGGATATGACCCTGGGACTACTGAAACTACAGTTTCCAATCCTGGACCAGAATCTGATTCATCACCTAGTTATCATAATCCTGTCAATTACCAGAATCCAAACATTCATCCGGCTCCTAAATTTCATGATTCTGCTAATGAACAGCATTCTGCAAATATTCCACCATCTATGCAATTTCATGACGGACTAGATAACAACAAGCATTCTTCTGTTGTTTCTCCATCATCTCACTCTTACACACCTGGAGTTTATCCTTCCCAAGACTATCATCCTCCTCCTCCACCTTCCCAAGACTATCATCCTCCTCCACCTTCCCAAGACTATCATCCTCCTCCACCTTCCCAAGACTTTCATTCTCCTCCACCTTCCCAGGACTATCATTCTCCTCCCCCTTCCCAGGACTATCATCCTCCACCACCTTCCCAAGATTATCATCCTCCACCGTCATCCCAAGATTACCATCCTCCACCTGCCAGGTCAGAAAGTTCTTATCCCGAACATTACAACCATCAGCAATACTCATCGGAGAATTCACAGCATTTAGGGCCTAACTACCCTTCTCATGAAAATTCCTCATATTCCTATCCCCATTTTCAGTCTTATCCAAGTTTTTCAGAAAGCAGCATCCCATCAGTCCCATCAAACTATACTTATTATCAAGGGTCGGATGCTTCATATTCTTCCCAGTCAGCTCCGCTAACTACAAGCCATTCATCAAGTGCTCATCACAGCTCTAGCAGCAGGAATGGAACTATTGTGGAACCTAAATCAACTTCTCAGACATACCATTATGACAGTAACTACCAGCCAGCACCTGAAAAAATAGCAGAGGCACATAAGGCTGCAAGATTTGCTGTTGGAGCACTTGCATTTGATGATGTCTCAATTGCAGTAGACTACTTGAAGAAATCACTCGAGTTGCTGACAAATCCATCCGCTGGCCAGTAA 1464 0.4419 MANENEPAKLLLPYLQRADELQKHEPLVAYYCRLYAMERGLKIPQSERTKTTNALLVSLMKQLEKDKKSIQIGPEDNLYLEGFALNVFGKADKQDRAGRADLNTAKTFYAASIFFEILNQFGAVQPDLEQKQKYAVWKAADIRKALKEGRKPTAGPPAGDEDLSIPFSSSSDGYDPGTTETTVSNPGPESDSSPSYHNPVNYQNPNIHPAPKFHDSANEQHSANIPPSMQFHDGLDNNKHSSVVSPSSHSYTPGVYPSQDYHPPPPPSQDYHPPPPSQDYHPPPPSQDFHSPPPSQDYHSPPPSQDYHPPPPSQDYHPPPSSQDYHPPPARSESSYPEHYNHQQYSSENSQHLGPNYPSHENSSYSYPHFQSYPSFSESSIPSVPSNYTYYQGSDASYSSQSAPLTTSHSSSAHHSSSSRNGTIVEPKSTSQTYHYDSNYQPAPEKIAEAHKAARFAVGALAFDDVSIAVDYLKKSLELLTNPSAGQ 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian7g01159 487 MobiDBLite consensus disorder prediction 164 205 - -
Vian7g01159 487 MobiDBLite consensus disorder prediction 148 440 - -
Vian7g01159 487 Gene3D Immunoglobulin FC, subunit C 443 482 - -
Vian7g01159 487 MobiDBLite consensus disorder prediction 234 255 - -
Vian7g01159 487 MobiDBLite consensus disorder prediction 336 439 - -
Vian7g01159 487 MobiDBLite consensus disorder prediction 258 326 - -
Vian7g01159 487 Pfam Vta1 C-terminal domain 444 481 IPR041212 -
Vian7g01159 487 Pfam Vta1 like 13 148 IPR039431 -
Vian7g01159 487 Gene3D - 4 152 IPR023175 -
Vian7g01159 487 PANTHER VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN VTA1 HOMOLOG 296 483 IPR044538 GO:0032511
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian7g01159 1 118 Glycosyltransferase AT2G31960 25.984 1.00e-07 53.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian7g01159 K12199 - gmx:100783739 752.281
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian7g01159 7 19862327 19864842 Vian7g01159 7 19862327 19864842 ECH