Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian7g01157 ATGCAGGTGCCAGAAAGTGTTGTGGACAAAAGGTCAAGTGCATACAACAAAGGAAGAGTGTTTATCCATGGTGCTGATGAGAGCACAGCAAATGCTTACAAGAAACAATTCCAAACAGATTTGGCAGGGTTTCTGATGGCAAGGTCAGTGGAGATGAAGAGAGAGGGGTCCATGTTCTTAGTTTGCTTGGCCAGAACTTCAGTGGACCCTACAGACCAAGGTGGGGCAGGCCTTCTTTTTGGGACCCACTTTCAGGATGCTTGGGATGATCTTGTCCAAGAGGGGTTGATTAGTCAAGAAAAACGAGACAGTTTTAACATTCCAGTTTATGCAGCAAGCCTGCAAGACTTCAAGGAGGTGGTTGAAGCGAATGGTTCATTCACCATAGACAAGCTTGAGGTATTCAAAGGAGGAAGTCCACTTGTGGTGAATCAACCAGATGATGCAAGTGAAGTAGGAAGAGCTCTAGCCAACAGCTGCAGGACCGTGTCAGGAGTTCTTGTTGATGCCCACATTGGTGACAAACTAAGTGAGGAACTTTTTCTTAGAGTGGAGCGTAGAGCCACTAGCCATGCCAAAGAGCTATTAGAGCAACTGCAGTTCTTTCACATAGTTGCATCCCTTTCCTTTAGAGACTGA 639 0.4601 MQVPESVVDKRSSAYNKGRVFIHGADESTANAYKKQFQTDLAGFLMARSVEMKREGSMFLVCLARTSVDPTDQGGAGLLFGTHFQDAWDDLVQEGLISQEKRDSFNIPVYAASLQDFKEVVEANGSFTIDKLEVFKGGSPLVVNQPDDASEVGRALANSCRTVSGVLVDAHIGDKLSEELFLRVERRATSHAKELLEQLQFFHIVASLSFRD 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian7g01157 212 Gene3D Vaccinia Virus protein VP39 33 138 IPR029063 -
Vian7g01157 212 Gene3D - 2 193 IPR042086 -
Vian7g01157 212 Pfam SAM dependent carboxyl methyltransferase 2 208 IPR005299 GO:0008168
Vian7g01157 212 PANTHER S-ADENOSYL-L-METHIONINE:CARBOXYL METHYLTRANSFERASE FAMILY PROTEIN 2 192 IPR005299 GO:0008168
Vian7g01157 212 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 2 209 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian7g01157 Vian-Chr7 19856603 19857998 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian7g01157 K18848 - gmx:100807953 400.979
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian7g01157 7 19856603 19857998 Vian7g01157 7 19856603 19857998 ECH