Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian7g01094 ATGGCCAGAACACTTCCGACCAAAGCATATGTTTTTCCTTTCACCAAGTGGTCGTTCTCTATGAACCCTGGCCCATTCACTTTAAAGGAGCATGCACTCATCACCATCTTTGCCAGTGCTGGATCTAGTGGTGTTTATGCCATCAACATTATCACTATTGTCAAGGCTTTCTACCACAGGAGCATCCACCCAATGGCTGCTTTCCTTCTCGCACTATCCACCCAGATGCTTGGTTATGGATGGGCTGGCATTTTCAGAAAATTCCTCGTTGATTCCCCGTACATGTGGTGGCCATCAAACCTTGTCCAGGTGTCTTTATTCAGGGCATTCCATGAAAAGGAGAAAAGGCTTAAAGGAGGAAACACAAGACTGCAATTCTTTGTGCTGGTGTTTGTGTCAAGTTTTGCTTATTACATCATTCCGGGTTATTTATTCCCAGGACTAGCAACAATCTCGTGGGTTTGCTTAGTTTGGAAAAAGTCCATCCTTGCTCAACAAATTGGTTCGGGTATTACTGGGCTTGGCATTGGTTCATTTGGCCTTGACTGGAACACAGTGGCTGGGTTTTTGGGGACCCCTTTGGCTACACCTGGCTTTGCCATCATCAACACACTGGTTGGATTTGTCCTCTTTATGTACGTTCTGATTCCCATTTCATATTGGAACAACGTATATGATGCCAAGAAGTTCCCCATCATCAGTTCCAACACCTTTGATTCCACTGGAAAAAAATATAATGTCACTCGGATTCTCAATGCTAAAAGTTTTGACATCGACATGGATAGTTATAACAATTACAGCAAGCTCTATCTTAGTATCACGTTTGCATTCGATTATGGATTGAGCTTTGCCGCTCTCACCGCCACCATTTCGCATGTTGTTCTCTTCCATGGAAAAACGATTGTTAAGATGTGGAAGAAGACAACATCTGCACTAAAAGAAAAAACATTCGGAGATGTGCACACGAGAATCATGAAGAAAAACTATGAACAAGTACCTGAGTGGTGGTTTGCGAGCATTTTGGCTCTAATGGTAGTTGTGGCGCTGATAACTTGTGAAGGCTTTGGAAAGCAACTCCAGCTGCCATGGTGGGGAGTTCTGATGTCTCTTGGTATTGCGTTAGTTTTCACTTTGCCAGTTGGAGTAATTCAAGCAACAACAAACATGCAAGCAGGGCTGAACGTGATCACAGAGCTGATAATCGGGTACATTTACCCCGGAAAGCCACTTGCTAATGTAGCCTTCAAGACATACGGCTACATCAGCATGTCACAGGCACTCGCATTCCTTGGTGACTTCAAATTAGGCCACTATATGAAAATCCCTCCAAAATCTATGTTCGTCGTGCAGTTGGTGGGCACCGTGGTTGCTTCATCCGTGTACTTTGGAACAGCATGGTGGCTTCTGACGACTGTTCCAAACATCTGTGATCAATCAAAATTGCCAGAAAATAGTCCATGGCAGTGCCCTGGTGACGATGTGTTTTACAATGCTTCGATCATATGGGGAGTGGTGGGTCCAAAGAGAATGTTTACCAAGGATGGAATTTACCCTGGAATGAATTGGTTTTTCCTGATCGGTGCACTTGTTCCTGTTCCGGTGTGGTTCTTTGCTCGGAAATACCCAAACAAGAGGTGGATTGAACTCATCAACATGCCCCTCATCATTATGGGTGCCGGAGGTATTCCTCCGGCGAGAACTGTGAACTACATAACCTGGGGAGCTACCGGAATCTTCTTCAATTTTTACATTTACAATAAGTTCAAGTCATGGTGGGCTCGCCATACTTACATTCTCTCAGCTGCATTGGATGCTGGCCTTGCTTTCATGGGAGTGGTTCTCTACTTTGCCCTCCAAAGTTACGACATTTTAGGTCCAACCTGGTGGGGTGCCGAAGCTGACCACTGCCCTTTGGCCAAATGTCCCACAGCTCCAGGCGTGATTGCTCATGGATGCCCTACTCTCTGA 1968 0.4522 MARTLPTKAYVFPFTKWSFSMNPGPFTLKEHALITIFASAGSSGVYAINIITIVKAFYHRSIHPMAAFLLALSTQMLGYGWAGIFRKFLVDSPYMWWPSNLVQVSLFRAFHEKEKRLKGGNTRLQFFVLVFVSSFAYYIIPGYLFPGLATISWVCLVWKKSILAQQIGSGITGLGIGSFGLDWNTVAGFLGTPLATPGFAIINTLVGFVLFMYVLIPISYWNNVYDAKKFPIISSNTFDSTGKKYNVTRILNAKSFDIDMDSYNNYSKLYLSITFAFDYGLSFAALTATISHVVLFHGKTIVKMWKKTTSALKEKTFGDVHTRIMKKNYEQVPEWWFASILALMVVVALITCEGFGKQLQLPWWGVLMSLGIALVFTLPVGVIQATTNMQAGLNVITELIIGYIYPGKPLANVAFKTYGYISMSQALAFLGDFKLGHYMKIPPKSMFVVQLVGTVVASSVYFGTAWWLLTTVPNICDQSKLPENSPWQCPGDDVFYNASIIWGVVGPKRMFTKDGIYPGMNWFFLIGALVPVPVWFFARKYPNKRWIELINMPLIIMGAGGIPPARTVNYITWGATGIFFNFYIYNKFKSWWARHTYILSAALDAGLAFMGVVLYFALQSYDILGPTWWGAEADHCPLAKCPTAPGVIAHGCPTL 655
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian7g01094 655 NCBIfam OPT family oligopeptide transporter 9 619 IPR004813 GO:0035673
Vian7g01094 655 PANTHER ISP4 LIKE PROTEIN 1 653 IPR004648 GO:0055085
Vian7g01094 655 Pfam OPT oligopeptide transporter protein 7 617 IPR004813 GO:0035673
Vian7g01094 655 NCBIfam small oligopeptide transporter, OPT family 12 621 IPR004648 GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian7g01094 Vian-Chr7 19153184 19155887 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian7g01094 1 653 Organic Solute Cotransporters AT4G26590 66.361 0.0 929
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian7g01094 - - gmx:100776230 1169.45
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian7g01094 7 19153184 19155887 Vian7g01094 7 19153184 19155887 ECH