Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian7g01077 ATGACTGTGGGGGCAGCGATATCTGTTGCAGATGGAAACTTGATGGTGTTGGGGAAGAAAGTGCTGAGCCATGTCCATGAAAACGTTGTTGTTAGCCCTGCATGTGAGGGTGCGTTGCTCAATGGGGCATTCATTGGGGTTGAATCCCATCAAAAGGGTAGTCGCACAGTCTTCCCAATCGGCAAGCTTGAGGGGTTGCGGTTTATGTGTGTTTTCCGGTTCAAGATGTGGTGGATGACGCAGAGAATGGGCACTTGCGGACAAGAAGTTCCCTTTGAGACGCAGTTCTTGCTTGTTGAAGCACAAAGTGGCTCTGATATTGATGCAGAAGAAGACCAATCTGCTGCTACCTATGCAGTTTTCTTACCCCTTCTGGAAGGAGATTTCAGAGCAGTTCTTCAGGGGAATGATCAAAACGAGATTGAGATCTGTGTGGAAAGTGGTTGTCCCGCTGTGGAGGACTTCGATGGGTCTCATTTGGTTTATATCGGAGCTGGATCCGACCCTTACGAAGTCATTACAACTTCTGTCAAAGCTGTGGAGAAACACTTACAGACCTTTGCTCATCGCGAGCGAAAGAAGATGCCAGATATGTTGAACTGGTTTGGATGGTGTACATGGGATGCTTTCTACACTAATGTCACTTCAGAGAATGTGAAGCAAGGATTACATAGCTTCGAGAAAGGTGGAATTCCTGCCAAGTTTGTTATAATTGATGATGGCTGGCAATCTGTTGACATGGACCCCAATGGTACTGAATGGAAATCTGATCATGCAGCCAATTTTGCAAATCGCTTAACCAACATCAAAGAGAATCACAAATTTCAGAAGGATGGCAAAGAAGGTGAAAGAGTAAATGACCCAGCTCTGGGACTTCGTCATATTACCAATGAAATCAAACAAGAGCATTATATAAAGTACGTATATGTGTGGCACGCAATAACAGGATATTGGGGTGGTGTTAAGCCTGGGGTGACCGGCATGGAGCACTACGACTCAAAGATGGCCTTCCCTGTCTCATCTCCTGGAGTTGAGTCAAATCAACCAGATGAAGCTTTGGCAACCATTGCCATCAATGGGCTTGGCCTTGTGAATCCCGAGAAAGTTTTTCACTTTTATGATGAACTTCACTCGTATTTGGCATCTGCTGGTGTTGATGGTGTCAAGGTTGATGTTCAGAATATCCTTGAAACTCTTGGAGCAGGACATGGTGGGAGGGTGAAACTTGCAAGAAAATACCACCAAGCATTAGAGGCATCAATTTCCAAGAACTTCCCTGATAATGGAATCATCTGTTGCATGAGTCACAACACTGATGGACTATACAGCGCAAAGCGTTCAGCTGTTATTAGGGCATCAGACGATTTCTGGCCAAGAGACCCTGCTTCCCACACGATTCACATTGCATCGGTGGCTTACAATACTATTTTCCTTGGTGAATTTATGCAGCCAGACTGGGATATGTTTCATAGCCTGCATCCAATGGCTGAATACCATGCAGCAGCACGAGCTGTAGGAGGATGTCCAATTTATGTCAGTGACAAGCCAGGACACCATGACTTTGATCTTTTGAAGAAACTTGTACTACCTGATGGTTCTATTCTGAGAGCTAAACTTCCAGGAAGACCAACAAAGGATTGTTTATTTACTGATCCAGCCAGAGATAGAAAGAGTCTCCTGAAGATTTGGAACATTAATGATTTTTCTGGAGTTGTTGCGGTATTCAATTGCCAAGGAGCTGGGTGGTGCAAAGTTGACAAGAAAAACCTTATCCACGATGACAATCCAGACACTGTCACAGGTTTCATTAGAGCTAAAGATGTTGACTATTTATCTAGGATAGCAGATGATAAATGGACAGGAGATGTCGTTCTATATTCCCATCTGGGTGGAGAAGTGGTTTACCTTCCAAAGGATGCAACCCTCCCAGTGACGTTGAAATCCAAAGAATATGAAATTTTCACAATAGTTCCGGTCAAGGAATTGAGCAATGACATCAGATTTGCTCCTATTGGTTTAATAAAGATGTTCAATTCAGGAGGGGCCGTCAAAGAATTCTTCAGTTGGAGATCTAATGAAAGTACAAATGTAACCATGAAAGTTCGTGGTTGTGGCCAATTTGGTGCTTATTCATCAGCTCAGCCAAAGTTAATAAGTGTCGATTCAGAAGAGGTAGAATTCCGGTATGAGGAAGAAACTGGATTGGTGACTGTTGAATTGAGGGTACCCGAGAAAGAGTTATACCAATGGAGTATTTCCATTGATTTTTGA 2271 0.4364 MTVGAAISVADGNLMVLGKKVLSHVHENVVVSPACEGALLNGAFIGVESHQKGSRTVFPIGKLEGLRFMCVFRFKMWWMTQRMGTCGQEVPFETQFLLVEAQSGSDIDAEEDQSAATYAVFLPLLEGDFRAVLQGNDQNEIEICVESGCPAVEDFDGSHLVYIGAGSDPYEVITTSVKAVEKHLQTFAHRERKKMPDMLNWFGWCTWDAFYTNVTSENVKQGLHSFEKGGIPAKFVIIDDGWQSVDMDPNGTEWKSDHAANFANRLTNIKENHKFQKDGKEGERVNDPALGLRHITNEIKQEHYIKYVYVWHAITGYWGGVKPGVTGMEHYDSKMAFPVSSPGVESNQPDEALATIAINGLGLVNPEKVFHFYDELHSYLASAGVDGVKVDVQNILETLGAGHGGRVKLARKYHQALEASISKNFPDNGIICCMSHNTDGLYSAKRSAVIRASDDFWPRDPASHTIHIASVAYNTIFLGEFMQPDWDMFHSLHPMAEYHAAARAVGGCPIYVSDKPGHHDFDLLKKLVLPDGSILRAKLPGRPTKDCLFTDPARDRKSLLKIWNINDFSGVVAVFNCQGAGWCKVDKKNLIHDDNPDTVTGFIRAKDVDYLSRIADDKWTGDVVLYSHLGGEVVYLPKDATLPVTLKSKEYEIFTIVPVKELSNDIRFAPIGLIKMFNSGGAVKEFFSWRSNESTNVTMKVRGCGQFGAYSSAQPKLISVDSEEVEFRYEEETGLVTVELRVPEKELYQWSISIDF 756
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian7g01077 756 SUPERFAMILY (Trans)glycosidases 196 527 IPR017853 -
Vian7g01077 756 PANTHER - 1 753 IPR008811 -
Vian7g01077 756 FunFam Probable galactinol--sucrose galactosyltransferase 1 199 526 - -
Vian7g01077 756 Pfam Raffinose synthase or seed imbibition protein Sip1 7 739 IPR008811 -
Vian7g01077 756 Gene3D Aldolase class I 197 527 IPR013785 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian7g01077 Vian-Chr7 18978872 18982531 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian7g01077 1 754 Glycoside Hydrolase AT1G55740 71.656 0.0 1106
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian7g01077 K06617 - gmx:100785506 1436.78
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian7g01077 7 18978872 18982531 Vian7g01077 7 18978872 18982531 ECH