Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian7g01073 ATGGAGAATGAGGCACATAGCATGTCATCTGATATAGGAATAGGTGTGAATGAGAAGATGGTTGAGGCACTTGAGTCAAGTGACAACATCCCATTGTTGCTCACCAACTCTAGCTCTCTCAAAAGGACAGGGACGGTGTGGACAGCAGTGGCACATATAGTGACTGGGGTGATAGGATCGGGAGTGCTGTCTCTGCCATGGAGCACTGCACAGCTTGGTTGGTTTGCAGGACCACTCTCAATCATTCTCATAGCTTCCATCACTCTGTTCTCTTCTTTTCTTCTATGCAATACTTATCGCCATCCCCATCCTGAACATGGTCCGAATAGGAGTGCCTCCTACCTCGATGTTGTCCATCTGCATTTAGGAATAAGTAATGGGCGGCTCAGTGGCCTTCTTGTGAATATAAGTTTGTATGGTTTTGCAATTGCCTTCGTCATTACAACAGCTATCAGCTTAAGAACAATCCAACATTCATTTTGTTACCACAACAAAGGGAGTGAAGCATCATGTGAATTTGCAGATGCATATTACATGCTGCTTTTTGGCGTTATCCAAATTATTCTCTCACAGATACCCAACTTCCATAACATCGAATGGTTGTCGGTTGTTGCTGCAATTATGTCCTTTACTTATTCTTTCATAGGAATGGGGCTTTCCATTGCACAAATCATAGAGAAAGGACATGCTGAAGGTAGCATTGGAGGAATCAGTACCTCCAGTGGAACTGAAAAGTTATGGCTGGTTTCTCAAGCACTTGGTGACATATCATTCTCATTTCCGTTCTCAACAATTATTATGGAAATACAGGATACTTTGAAATCACCTCCACCTGAAAACCAAACCATGAAGAAGGCCTCAGTAATTGCAGTCACTGTCACAACATTTATGTACCTCAGTTGTGGAGGTGCTGGATATGCTGCCTTTGGTGATAATACACCAGGAAACCTTTTAACAGGGTTTGAATCCTCTTACTGGCTTGTGAGCTTTGCTAACGTCTGTATAGTGGTTCACCTAGTTGGTTCATATCAGGTGTATTGCCAGCCACTTTTTGCCACTGTTGAGAGTTGGTTCCGTTTTAATTTCCCGGATAGTGAATTTATGAATCACACATATATCTTGAAACTCCCGTTGCTACCAGCCTTTGAACTTAATTTTCTCAGCCTGTCTTTCAGAACTGCTTATGTTGCATCAACAGTTGTGATTGCAATGGTCTTTCCCTACTTCAACCAGATTTTGGGGGTTCTGGGTAGCATGATTTTTTGGCCATTGACCATATATTTTCCTGTGGAAATCTATTTGAATCAATCCTCTACTGTACCATGGACGACTAAGTGGGTCCTGCTTCGGACTTTCAGTATTTTTGGCTTTGTTTTTGGATTGTTCACTCTCACTGGATGTATTAAAGGAATAGTAGCTCAAAAAATTGGCTGA 1434 0.4205 MENEAHSMSSDIGIGVNEKMVEALESSDNIPLLLTNSSSLKRTGTVWTAVAHIVTGVIGSGVLSLPWSTAQLGWFAGPLSIILIASITLFSSFLLCNTYRHPHPEHGPNRSASYLDVVHLHLGISNGRLSGLLVNISLYGFAIAFVITTAISLRTIQHSFCYHNKGSEASCEFADAYYMLLFGVIQIILSQIPNFHNIEWLSVVAAIMSFTYSFIGMGLSIAQIIEKGHAEGSIGGISTSSGTEKLWLVSQALGDISFSFPFSTIIMEIQDTLKSPPPENQTMKKASVIAVTVTTFMYLSCGGAGYAAFGDNTPGNLLTGFESSYWLVSFANVCIVVHLVGSYQVYCQPLFATVESWFRFNFPDSEFMNHTYILKLPLLPAFELNFLSLSFRTAYVASTVVIAMVFPYFNQILGVLGSMIFWPLTIYFPVEIYLNQSSTVPWTTKWVLLRTFSIFGFVFGLFTLTGCIKGIVAQKIG 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian7g01073 477 Pfam Transmembrane amino acid transporter protein 42 470 IPR013057 -
Vian7g01073 477 PANTHER OS05G0424000 PROTEIN-RELATED 44 461 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian7g01073 Vian-Chr7 18953029 18955920 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian7g01073 34 454 Organic Solute Cotransporters AT1G77380 49.176 9.51e-150 434
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian7g01073 K24917 - gmx:100788056 825.854
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian7g01073 7 18953029 18955920 Vian7g01073 7 18953029 18955920 ECH