Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian7g00729 ATGGAGGACGTTGAAGACAAGCCACCCCCAGAAACCTCTGTAATAATGGCTGAGCAGAAGCCGCTGGCAGAAACCCCTGAAGAAAACAGTGAAGTGATGGCTGGCACTGGTTTTCCCAGAGAGTTCTCTGACTTAGAAGTGTCCCTAAATACTTCTAACGATAAAACTATTGCACAAGTTGAACATCTTCCCACAGGTGATTCAGCTTCTATTCCTGAAGCTACAATTCATGCAACAGAAGAAAGCCACCTAGATGAAAATAACTTTAACAGGCAGAAGGAAGGTGTTTCTGCTGTCACTGCTAGCAGTGATGTTGATAATCTGATGAATCCCTCAACATCATCTTCTGAAGCAAAAGAGTTGCAGACTGGCCCCGTAGAACTAATAACAGACTCACCTCAAACCATGGTTGCTGATTTTGCAGTAGATAATTCAGCTTCAACCTCAAAAGATGCTGTTCACGTAAGGGAACAAAGCAACCAAGGAGCCATGCCTGCAGATTCTGAAGCTGGAGAATTAGAAGATATGTCAAATAGGCAACAGGGTGGTGGTTCTACTTTCTGTGATGGCAGTGATGCTGATAATCAGATGGAATTGTCAACTTCCTTTTTCAAGGAAAAAGAGTTGCAGAATGATCACAAAAAACTAAAGATTGATATACCTCAAACAATTGATACTGATGTTGTTGTGGGAGCTGTTGATCCACCTGCTGCCAGTGATCAGATGACTTCCTCTTCTGAACAGATAGAGTTGCAGAATGATCAGAAAGAACAGAAGACAGATCCGTCTCAAGACAATGTTACTGATGTTGCTTTGAGAGCTGATGATTCACCATCTGCCAGTGATGATAGTCAGATAAAACTCTTGGATTCCTCTTCTGAAAAAACAGAGTTGCAGAATGACCAGAAAGAACAGAAGACAGATCCATCTCAAATCAATGTTACTGATACTACTGTGGGAGCCGCTGACTCACCTAGTTATGCCAAGCAGATGGCTGCAAGAAGAGGCCTTATTGATACAGCTGCTCCATTTGAATCTGTCAAGGAAGCTGTTTCCAAATTTGGAGGCATTGTGGATTGGAAGGCTCATAGAATCCAGACAGTGGAGAGACGCAAACATGTAGAGCATGAACATGAAAAGGCACAGCAGCTGATCCCAGAATATAGAAAAAAAGCCGAGGCTGCAGAGAAAGAAAAAATGAGAGTACTGCAGGAGCTGGATACCACTAAGAGACTAATAGAAGAGCTTAAACTCAACCTAGAGAGGGCTCAAACAGAAGAGCGTCAGGCAAGACAAGACTCAGAACTTGCAAAGCTGAGAGTGGAAGAGATGGAGCAAGGCATTGCAGATGACTCCAGTGTTGCAGCAAAGGCACAGCTTGAGGTAGCTAGAGCTAGGTATTCATCAGCTGTCATAGAGTTAACATCTATAAAAGAAGAGTTGGATTCATTGCGTGGAGAATATGCCTCCTTAGTTGTTGAAAAAGATGAAGCTGTCAAGAAATCTGAAGAGGCTATTGCTTCATCAAAGCAAGTGGAGAAGACAATGGAAGACTTGACCATTGAGCTGATTGCAACAAAGGAGGCACTGGAAAGTGCACATGCTGCACACATGGAAGCAGAGGAACAGAGAATAGGAACAGTCATGGCAAAAGATCAGGACTGTCTCCTTTGGGAGAAGGAACTTAAACAGGCAGAAGAAGAACTCCAGAGTCTCAACCAGAAAATTTTGTCTGCTAAGGATCTCAAATCTAAATTGCAAGCAGCCTCATCTTTGCTGGTTGATTTGAAAGCTGAATTAAGTGTTTATATGGAATCAAAGCCTGACCCAGAAGGTGATGAGGAAGGAATCTCCAAAGAAGGGCCAGAGAAACCAGAGAAGAAGACACACAGTGAAATACAAGAAGCAGTTGCATCTGCCAAAAAGGAACTTGAGGAAGTAAAGCTTAACATAGAGAAAGCCACCACTGAGGTAAATTACTTGAAGGTGGCCGTAGCCTCCTTGAAAACAGAACTTGAAAATGAGAAACTATCCTTTGCCTCCATGAAGCAAAGAGAGGGAATGGCCTCCATCACAGCTGCATCTCTTGAAGGTGAACTGGAGAACACTATATCAGAAACGGTTTTGGTTCAGATGAAGGAAAAGGAAGCCAGAGAGAAAATTGCCGTGCTACCAAAGAAGCTACAGCAAGCAGTTGAAGAGAATAATCAGGCCAAATTGCTTGCTCAAGAAGCTCGTGAAGAGTTGCAGAGAGTAGAGGAGGAGGCTGAAGTATTAAAGGGCAGTGCAAGCACATTGCAGAGCAAATTACTAGCAGCTGAAATGGAGATAGAAGCTGCCAGGGCATCTGAAAGGTTGGCAATAGCAGCAACTAAAGCATTGCAAGAGAGTCAGTCACCTAAGAGCAACACCGAAGTGGATTCATCCAATTGGGTGACACTTTCAGTGGAGGAGTACTATAATCTCAGCAAACAAGCACATGATGCAGAAAAAGAAGCCAACATGAGGGTTGCAACAGCTAATTCTAAAATTAATGCAGCGAAGGAATCTGAATTGAGAACCTTGGAGAAGTTGAATAGTGTGAGTAGAGAGATGGGTTTGAGAAGAGAATCTCTGAAGATGGCCATGGAGAAAGCTGAAAAGGCCAGGGAGGGAAAATTAGGTGTAGAACAAGAACTAAGAAAATGGAGGGCTGATCATGGGCAACGAAGAAAGGCTGGTTCAGTAGGCAAAGAATTGGTTAAGCATCAAAGTAGTAAAAGTTCAGACGCTGCTCTTGAAAGACACAAAGGATCAAACAGTTTTGACAAATCTCATCGTTTACCTGTTCCTCTTCGTTACTTTTCCAGTTCAAAGTCATACGTCCATTCTAACAGTGGATCTGTGTCATCATCGGATGCGAAGACCGGAAAGAAGAAGAAGAAGTCATTCTTCCCATGGGTTTTGATGTTCTTTGGGAAGAAAAAGTCTCACACAACACATTCAGGGTAA 2991 0.43 MEDVEDKPPPETSVIMAEQKPLAETPEENSEVMAGTGFPREFSDLEVSLNTSNDKTIAQVEHLPTGDSASIPEATIHATEESHLDENNFNRQKEGVSAVTASSDVDNLMNPSTSSSEAKELQTGPVELITDSPQTMVADFAVDNSASTSKDAVHVREQSNQGAMPADSEAGELEDMSNRQQGGGSTFCDGSDADNQMELSTSFFKEKELQNDHKKLKIDIPQTIDTDVVVGAVDPPAASDQMTSSSEQIELQNDQKEQKTDPSQDNVTDVALRADDSPSASDDSQIKLLDSSSEKTELQNDQKEQKTDPSQINVTDTTVGAADSPSYAKQMAARRGLIDTAAPFESVKEAVSKFGGIVDWKAHRIQTVERRKHVEHEHEKAQQLIPEYRKKAEAAEKEKMRVLQELDTTKRLIEELKLNLERAQTEERQARQDSELAKLRVEEMEQGIADDSSVAAKAQLEVARARYSSAVIELTSIKEELDSLRGEYASLVVEKDEAVKKSEEAIASSKQVEKTMEDLTIELIATKEALESAHAAHMEAEEQRIGTVMAKDQDCLLWEKELKQAEEELQSLNQKILSAKDLKSKLQAASSLLVDLKAELSVYMESKPDPEGDEEGISKEGPEKPEKKTHSEIQEAVASAKKELEEVKLNIEKATTEVNYLKVAVASLKTELENEKLSFASMKQREGMASITAASLEGELENTISETVLVQMKEKEAREKIAVLPKKLQQAVEENNQAKLLAQEAREELQRVEEEAEVLKGSASTLQSKLLAAEMEIEAARASERLAIAATKALQESQSPKSNTEVDSSNWVTLSVEEYYNLSKQAHDAEKEANMRVATANSKINAAKESELRTLEKLNSVSREMGLRRESLKMAMEKAEKAREGKLGVEQELRKWRADHGQRRKAGSVGKELVKHQSSKSSDAALERHKGSNSFDKSHRLPVPLRYFSSSKSYVHSNSGSVSSSDAKTGKKKKKSFFPWVLMFFGKKKSHTTHSG 996
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian7g00729 996 Coils Coil 728 792 - -
Vian7g00729 996 Coils Coil 378 442 - -
Vian7g00729 996 MobiDBLite consensus disorder prediction 91 121 - -
Vian7g00729 996 MobiDBLite consensus disorder prediction 178 204 - -
Vian7g00729 996 MobiDBLite consensus disorder prediction 875 936 - -
Vian7g00729 996 Pfam Weak chloroplast movement under blue light 335 903 IPR008545 -
Vian7g00729 996 Coils Coil 474 494 - -
Vian7g00729 996 MobiDBLite consensus disorder prediction 1 34 - -
Vian7g00729 996 MobiDBLite consensus disorder prediction 605 637 - -
Vian7g00729 996 MobiDBLite consensus disorder prediction 205 221 - -
Vian7g00729 996 MobiDBLite consensus disorder prediction 875 939 - -
Vian7g00729 996 Coils Coil 548 599 - -
Vian7g00729 996 MobiDBLite consensus disorder prediction 305 324 - -
Vian7g00729 996 MobiDBLite consensus disorder prediction 288 304 - -
Vian7g00729 996 MobiDBLite consensus disorder prediction 81 123 - -
Vian7g00729 996 PANTHER HEAVY CHAIN, PUTATIVE, EXPRESSED-RELATED-RELATED 336 979 - -
Vian7g00729 996 MobiDBLite consensus disorder prediction 145 325 - -
Vian7g00729 996 MobiDBLite consensus disorder prediction 145 165 - -
Vian7g00729 996 Coils Coil 630 657 - -
Vian7g00729 996 MobiDBLite consensus disorder prediction 953 973 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian7g00729 Vian-Chr7 15513986 15517229 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian7g00729 - - gmx:100779436 1186.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian7g00729 7 15513986 15517229 Vian7g00729 7 15513986 15517229 ECH
Vian7g00729 7 15513986 15517229 Vian4g02254 4 39418094 39421972 PCT