Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian7g00601 ATGGTCGGACGTAACTCGCTTTCCCTCCTCTCCAAGCCAGGTGGGGGCGTACCTGTTAAAGGTGCTCTGACGCTCAAGTCATTGACTCGTTATTTCGGTGGCTCGGCCAATTTGAATCAAGACCTCTTCCATTCTCGATCACCGCCGTCTCTGTCGATGTCGTCTTATTCCGAGAACGACGCCGAGGCTCTCCGACGTAAGCGCATCCTCTCCAGCAAGCTCTACTTCGACGTGTCCCCGTCCAAGGTTCCGCTAATCTACTCCGAATCCTATGACATATCGTTTCTCGGCATAGAGAAACTGCATCCGTTTGATTCGTCGAAGTGGGGACGCATTTGTCGATTCCTCGTTTCGTTTGGTATTCTCGACAAAGAAAGCATCGTTGAGCCTCTCGAAGCTTCCAAGGATGATCTTCTAGTGGTTCACACAGAATTGTATCTGAATAGCCTGAAGGGGAGTTCAAAAGTTGCTATGATAGTTGAGGTCCCTCCCGTGGCATTAATTCCCAATTGCCTTGTGCAACAAAAAGTTCTTTTCCCATTCAAGAAGCAGGTTGGAGGAACTGTACTGGCTGCAAAACTTGCAAAGGAGAGAGGATGGGCCATTAATGTGGGAGGAGGTTTTCATCACTGCTCTGCAGAAAAAGGAGGTGGATTCTGTGTTTATGCAGATATTTCTCTTTGCATCCACTTTGCTTTTGTTCAGTTGAATATATCAAGGGTGATGATCATTGATCTTGATGCACATCAAGGAAACGGTCATGAAATGGACTTTGCCTACGATAGCCGAGTCTATATCTTGGATATGTACAATCCTGGAATTTATCCTTTGGATTACGAGGCGAGAAACTACATAAATCAGAAAGTTGAAGTAAAGAGTGGGACACTTACAGAAGAGTACCTGCAAAAATTAGACGAAGCACTAGAGGTTGCTGGGCGTAGGTTTAACCCTGAGTTGGTAATTTATAATGCTGGAACCGACATCCTACAAGGAGATCCGTTAGGAAGGTTGGAGATCAGCCCCGAAGGAATTGCCCTTAGAGATGAAAAAGTTTTCCGGTTTGCTCGTGAGAAGAACATTCCCATCGTCATGCTCACTTCAGGTGGCTACATGAAATCTAGTGCTAGAGTGATTGCAGATTCAATAATCAATCTTTCTAATAAATGCTTGATAGAAACGGGTGGAGCTCCAAAGTCTGCGTGA 1203 0.4555 MVGRNSLSLLSKPGGGVPVKGALTLKSLTRYFGGSANLNQDLFHSRSPPSLSMSSYSENDAEALRRKRILSSKLYFDVSPSKVPLIYSESYDISFLGIEKLHPFDSSKWGRICRFLVSFGILDKESIVEPLEASKDDLLVVHTELYLNSLKGSSKVAMIVEVPPVALIPNCLVQQKVLFPFKKQVGGTVLAAKLAKERGWAINVGGGFHHCSAEKGGGFCVYADISLCIHFAFVQLNISRVMIIDLDAHQGNGHEMDFAYDSRVYILDMYNPGIYPLDYEARNYINQKVEVKSGTLTEEYLQKLDEALEVAGRRFNPELVIYNAGTDILQGDPLGRLEISPEGIALRDEKVFRFAREKNIPIVMLTSGGYMKSSARVIADSIINLSNKCLIETGGAPKSA 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian7g00601 400 PRINTS Histone deacetylase superfamily signature 240 255 IPR000286 -
Vian7g00601 400 PRINTS Histone deacetylase superfamily signature 206 229 IPR000286 -
Vian7g00601 400 PRINTS Histone deacetylase superfamily signature 317 327 IPR000286 -
Vian7g00601 400 CDD HDAC_classIV 102 385 IPR044150 GO:0004407|GO:0016575
Vian7g00601 400 FunFam Histone deacetylase 11 83 392 - -
Vian7g00601 400 Pfam Histone deacetylase domain 102 383 IPR023801 -
Vian7g00601 400 SUPERFAMILY Arginase/deacetylase 80 385 IPR023696 -
Vian7g00601 400 Gene3D Histone deacetylase domain 82 393 IPR037138 -
Vian7g00601 400 PANTHER HISTONE DEACETYLASE 2-RELATED 85 385 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian7g00601 K11418 - gmx:100781276 644.81
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian7g00601 7 13881713 13888052 Vian7g00601 7 13881713 13888052 ECH