Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian7g00581 ATGGAGACCAACGCATCTTCTGACAACATCATCTCAAACAAGTACATGGTACCTGAAAAACAACCTTACCGAACCTGGTACCACTTTCAGCCCCCACAAAATTGGATGAATGATCCAAATGGACCAATGTACTACAAAGGAGTTTACCATTTTTTCTATCAATTCAACCCTTATGCACCAACTTTTGGTAGGCATATGGTATGGGGTCATTCTGTGTCCTATGATCTCATCAATTGGATTCATCTAAATCATGCTCTTGAACCAAGTGAGTCCTATGATATCAATGGCTGCTATTCTGGCTCAATCACAATCCTCCCTGGGGAAAAACCTATCATTATGTATACAGGGAGTGATTCTAACAAACATCAAGTTCAGAACTTGGCTGTGCCAAAGAATCTATCAGACCCCTTCTTAAGGGAATGGGAGAAACACCCTCAAAACCCTATCTTGATTCCACCCAGTGGAGTTGAAGTGGATGGTTTCAGAGACCCTACAACTGCTTTGCAAGGAAGTGATGGCAAGTGGAGAGTGATCATTGGTGCCAAAAATGGTGATGAAGGGAAGGCTCTTCTCTATTATAGTGAGGATTTTGTTCATTGGAAACTTTTTCCTAATCCTATGTATGCATCAGAAAACACTGGAATGTTTGAGTGTCCAGATTTTTTTCCAGTGTACATCAGTGGCACAAAGAATGGGGTGGATACATCTGTCCACAACAGCAGTGTTAAGCATGTCTTGAAAACCAGCTATCAGAACAAACAACTAGAATACTATTTTCTAGGTGACTATTTCCTTGATCAGGAAAAGTTTGTTGCTGATGCTGATTTGGGAGGACCAAATCTGAACTTAATATTGGACCATGGAATGTTTTATGCTTCCAAGTCATTTTTTGACTATGCCAAAAACAGAAGGATATTGTGGGGATGGTCAAAGGAGTGTGACACCACACAAGATGATTATGAGAAAGGATGGGCTGGTCTACAGAGTATTCCAAGGCAAGTTTGGCTTCATACAAATGGGAAGATGTTGATGCAGTGGCCAATTGAAGAGGTAGAAAAGCTACGTGAGAATCAAATTAGCATAAAGGGAGAGAAACTTGTTGGTGGATCAAGTCTTGAAGTCTCAGGTATCACTGCGTCACAGGCCGATGTAGAAGTGTTGTTTGAGCTTCCAGAACTAGAGAATGCAGAGTTTCTAGATGAAAGTGAAGTTGATCCTCACTTACTTGATCAAAGCAGGTCTTCATTGCGGGAGAAGCTTTATAAACCCTCATATGGAACTATATTTGACATAGACCCTAATCAAAAAACAATTTCACTCAGAAGTTTGATTGATCGCTCCATTGTTGAGAGTTTCGGGGAGAAAGGGAAAATTTGTATTACGAGTAGAGTTTATCCCTCGTTGGCTATTGACAAAGATGCTCATCTTTTTGCTTTCAACAATGGAAGACAGAGTGTGGTGATTTCAGAACTGAATGCTTGGAGCATGAAGCATGCAGAATTTGGCCAAGAAGAAAGCATAAAATAG 1527 0.4054 METNASSDNIISNKYMVPEKQPYRTWYHFQPPQNWMNDPNGPMYYKGVYHFFYQFNPYAPTFGRHMVWGHSVSYDLINWIHLNHALEPSESYDINGCYSGSITILPGEKPIIMYTGSDSNKHQVQNLAVPKNLSDPFLREWEKHPQNPILIPPSGVEVDGFRDPTTALQGSDGKWRVIIGAKNGDEGKALLYYSEDFVHWKLFPNPMYASENTGMFECPDFFPVYISGTKNGVDTSVHNSSVKHVLKTSYQNKQLEYYFLGDYFLDQEKFVADADLGGPNLNLILDHGMFYASKSFFDYAKNRRILWGWSKECDTTQDDYEKGWAGLQSIPRQVWLHTNGKMLMQWPIEEVEKLRENQISIKGEKLVGGSSLEVSGITASQADVEVLFELPELENAEFLDESEVDPHLLDQSRSSLREKLYKPSYGTIFDIDPNQKTISLRSLIDRSIVESFGEKGKICITSRVYPSLAIDKDAHLFAFNNGRQSVVISELNAWSMKHAEFGQEESIK 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian7g00581 508 Pfam Glycosyl hydrolases family 32 C terminal 350 495 IPR013189 -
Vian7g00581 508 Pfam Glycosyl hydrolases family 32 N-terminal domain 28 347 IPR013148 -
Vian7g00581 508 CDD GH32_Fruct1-like 34 336 - -
Vian7g00581 508 ProSitePatterns Glycosyl hydrolases family 32 active site. 28 41 IPR018053 GO:0004553|GO:0005975
Vian7g00581 508 Gene3D - 409 496 - -
Vian7g00581 508 Gene3D Glycosyl hydrolase domain; family 43 33 359 IPR023296 -
Vian7g00581 508 Gene3D - 360 408 - -
Vian7g00581 508 PANTHER BETA-FRUCTOFURANOSIDASE, INSOLUBLE ISOENZYME CWINV1-RELATED 18 401 - -
Vian7g00581 508 SUPERFAMILY Concanavalin A-like lectins/glucanases 347 498 IPR013320 -
Vian7g00581 508 SMART glyco_32 28 456 IPR001362 GO:0004553|GO:0005975
Vian7g00581 508 SUPERFAMILY Arabinanase/levansucrase/invertase 20 348 IPR023296 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian7g00581 Vian-Chr7 13616300 13618724 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian7g00581 43 501 Glycoside Hydrolase AT5G11920 50.391 3.74e-174 499
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian7g00581 - K01193 vra:106763740 905.205
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian7g00581 7 13616300 13618724 Vian7g00581 7 13616300 13618724 ECH