Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian7g00580 ATGGAGATCAATTCACACAATCTCAATTCTACCATGAACAAGGTACCTCAGAAACAACCTTACAGAACTTGGTACCACTTTCAACCTCCAACATATTGGATGAATGATCCAAATGCACCAATGTACTACAAAGGAGTTTACCACTTTTTCTACCAACATAATCCTCATGCAGCAACCTTCGGTGAGAAAATGGTGTGGGCTCACTCTGTGTCCTATGATCTCATCAACTGGATTCATCTGAACCATGCTATTGAGCCAAGTGAGCCGTTTGATCTTAACAGTTGTTGGTCAGGGTCAGCCACTATAATCCCAGGAAATGAACATCCTGTGATTCTGTACACAGGAATTGATGATAAAAAGCACCAAGTTCAAAACATGGCTATGCCAAAGAATCTATCTGACCCCTTCTTAAGGGAATGGGTGAAACACCCTCAAAACCCTGTCATGACACCACCAATTGGGGTTGAAGTTGATAGTTTCAGAGACCCTTCAACTGCTTGGCAGGAAAAGGATGGAAAATGGAGGGTAGTCATTGGTGCTCAAAATGGTGATGAAGGGAAGGTGGTTCTCTACCAAAGTGAGGATTTTGCTAATTGGACAGTGGAATTGAATCCTTTTTTTGCATCAGATAATACTGGAGTTTGTGAGTGTCCAGATTTTTTTCCTGTGTCCATCAATAGCACAAATGGGGTGGATACATCTGTCCAAGATCAAAGTGTTAGACATGTGTTGAAGATAAGCTATTACCGCAGAAATCAGGACTATTATTTTCTTGGTAAATATGCCAATGGTGATGGAAACTTCATTCCAGATGTTAAATTCACAGGAACTAGTTTGGACTTAAGGTTTGACTATGGTAAATTTTATGCCTCAAAGTCATTTTTTGACCATGCTAAGAGCAGAAGGATACTATGGGCGTGGGTGGACGAGTGTGACACTAGAGATGATGGCATTGAGAAAGGATGGGCTGGTCTTCAGTGTATTCCAAGGGAAGTTTGGCTTGATGAAAGTGGAAACCGGTTAATGCAATGGCCAATTGAAGAGGTAGAAAAGCTACGTGACAAACAAATTAGCATAAAGGGAGAGAAACTTGTTGCTGGATCAATTCTTGAAGTCTCAGGTATCACTGCGTCACAGGCCGATGTAGAAGTGTTGTTTGAGCTTCCAGAGCTAGAGAATGCAGAGTTTCTAGATGAAAATGAAGTTGATCCTCACTTACTGTGTAGTGAAGAATATGTATCAAGAAGTGGCATAATAGGGCCATTTGGTTTGTTTGCTTTAGCATCTGAGGATCAAACAGAACACACTGCAATCTTCTTCAGAATATATAAAACCTCCAATAGATATGTATGTTTCATGTGCAGTGATCAAAGCAGATCTTCATTGCGGGAGAATCTTGATAAATCCTCATATGGAACTATATTTGACATAGACCCTAATCAAAAAACAATCTCACTCAGAAGTTTGATTGATCGCTCCATTGTTGAGAGTTTTGGGGAGAAAGGGAGAATTTGTATTACGAGTAGAGTTTATCCCTCGTTGGCTATTGACAAAGATGCTCATCTTTTTGCTTTCAACAATGGAAGACAGAGTGTGGTGATTTCAGAACTGAATGCTTGGAGCATGAAGCATGCAGAATTTGACCAAGACGAAAGCATATATCAGCCGTAG 1671 0.4045 MEINSHNLNSTMNKVPQKQPYRTWYHFQPPTYWMNDPNAPMYYKGVYHFFYQHNPHAATFGEKMVWAHSVSYDLINWIHLNHAIEPSEPFDLNSCWSGSATIIPGNEHPVILYTGIDDKKHQVQNMAMPKNLSDPFLREWVKHPQNPVMTPPIGVEVDSFRDPSTAWQEKDGKWRVVIGAQNGDEGKVVLYQSEDFANWTVELNPFFASDNTGVCECPDFFPVSINSTNGVDTSVQDQSVRHVLKISYYRRNQDYYFLGKYANGDGNFIPDVKFTGTSLDLRFDYGKFYASKSFFDHAKSRRILWAWVDECDTRDDGIEKGWAGLQCIPREVWLDESGNRLMQWPIEEVEKLRDKQISIKGEKLVAGSILEVSGITASQADVEVLFELPELENAEFLDENEVDPHLLCSEEYVSRSGIIGPFGLFALASEDQTEHTAIFFRIYKTSNRYVCFMCSDQSRSSLRENLDKSSYGTIFDIDPNQKTISLRSLIDRSIVESFGEKGRICITSRVYPSLAIDKDAHLFAFNNGRQSVVISELNAWSMKHAEFDQDESIYQP 556
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian7g00580 556 FunFam Beta-fructofuranosidase, insoluble isoenzyme CWINV1 357 542 - -
Vian7g00580 556 ProSitePatterns Glycosyl hydrolases family 32 active site. 26 39 IPR018053 GO:0004553|GO:0005975
Vian7g00580 556 SMART glyco_32 26 502 IPR001362 GO:0004553|GO:0005975
Vian7g00580 556 SUPERFAMILY Concanavalin A-like lectins/glucanases 345 544 IPR013320 -
Vian7g00580 556 CDD GH32_Fruct1-like 32 334 - -
Vian7g00580 556 Gene3D Glycosyl hydrolase domain; family 43 32 357 IPR023296 -
Vian7g00580 556 Pfam Glycosyl hydrolases family 32 C terminal 348 541 IPR013189 -
Vian7g00580 556 Gene3D - 358 542 - -
Vian7g00580 556 Pfam Glycosyl hydrolases family 32 N-terminal domain 26 345 IPR013148 -
Vian7g00580 556 SUPERFAMILY Arabinanase/levansucrase/invertase 17 346 IPR023296 -
Vian7g00580 556 PANTHER BETA-FRUCTOFURANOSIDASE, INSOLUBLE ISOENZYME CWINV1-RELATED 13 546 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian7g00580 Vian-Chr7 13611921 13614402 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian7g00580 36 550 Glycoside Hydrolase AT1G55120 53.333 0.0 582
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian7g00580 - K01193 gmx:100806220 1001.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian7g00580 7 13611921 13614402 Vian7g00580 7 13611921 13614402 ECH