Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian7g00555 ATGGCTTCTCTCTCCGTTTCAATGGTTCTGCCACTCAGCTCCGCCAGCAAGACCAGGTCAAAGTCAAACCCTCCTCCCTCCGAAGCGTTCTTGAAGAGGAGTGCGGCGAAGAAATTGTCAGAGGCAGAACCAAAAAGGCTCAACATGGAAGCGTCTTTGAAGGAAATAGCAGTGAAGGGTCTCAGCGCTGCTGTAGTAACATCGGGCATGGTGATTCCTGAAGTGGCTCATGCAGCGGGATATGACTTCTCTCCTTCGCTCCAAAACTTTCTGCTAAGTATTGCTGCTGGTGGGGTTGTGCTCGTGGCGATATTTGGTGCTGTTATCGGAGTCGCCAACTTTGATCCAGTTAAGAGAACTTGA 363 0.5041 MASLSVSMVLPLSSASKTRSKSNPPPSEAFLKRSAAKKLSEAEPKRLNMEASLKEIAVKGLSAAVVTSGMVIPEVAHAAGYDFSPSLQNFLLSIAAGGVVLVAIFGAVIGVANFDPVKRT 120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian7g00555 120 Gene3D Single helix bin 83 120 - -
Vian7g00555 120 MobiDBLite consensus disorder prediction 13 27 - -
Vian7g00555 120 PANTHER OS07G0673550 PROTEIN 1 120 - -
Vian7g00555 120 MobiDBLite consensus disorder prediction 13 36 - -
Vian7g00555 120 Pfam Photosystem II reaction centre X protein (PsbX) 84 119 IPR009518 GO:0009523|GO:0015979|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian7g00555 Vian-Chr7 13192252 13192614 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian7g00555 - - gmx:100305487 126.716