Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian7g00546 ATGGATTTCAGAGTGATGGGTTTGGAATCTCCATTTTTCCCCACGCTGCACCGCATGATGGACATGTCAGAGGAGGGTGCAGGGGAGAAGACAAACAATGCTCCTACACAGAAATACGTGCGAGACGCGAAAGCGATGGCTGCAACAGCTGCGGATGTGAAAGAATATCCGAATTCCTACGTGTTCCTGATCGACATGCCGGGATTGAAATCTGGTGACATAAAGGTTCAGGTTGAAGATGATAACGTGCTTTTGATTAGCGGGGAGAGAAAGAGGGAAGAAGAGAAAGAAGGGGTGAAGTTTGTGAGAATGGAACGAAGAATTGGGAAATTCATGCGTAAGTTTGTTTTACCTGAAAATGCAAACATTGATGCAATCTCTGCTGTGTGTCAAGATGGTGTTCTCAGTGTTACTGTGCAGAAATTGCCTCCTCCTGAACCTAAGAAGCCTAGGACTATTGAAGTGAAGATTGCTTGA 477 0.4528 MDFRVMGLESPFFPTLHRMMDMSEEGAGEKTNNAPTQKYVRDAKAMAATAADVKEYPNSYVFLIDMPGLKSGDIKVQVEDDNVLLISGERKREEEKEGVKFVRMERRIGKFMRKFVLPENANIDAISAVCQDGVLSVTVQKLPPPEPKKPRTIEVKIA 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian7g00546 158 FunFam 17.3 kDa class II heat shock protein-like 11 157 - -
Vian7g00546 158 Gene3D - 5 157 IPR008978 -
Vian7g00546 158 SUPERFAMILY HSP20-like chaperones 36 150 IPR008978 -
Vian7g00546 158 ProSiteProfiles Small heat shock protein (sHSP) domain profile. 42 156 IPR002068 -
Vian7g00546 158 PANTHER HEAT-SHOCK PROTEIN 20 FAMILY MEMBER 14 156 IPR031107 -
Vian7g00546 158 Pfam Hsp20/alpha crystallin family 52 156 IPR002068 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian7g00546 Vian-Chr7 13037945 13038421 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian7g00546 K13993 - gmx:100500666 255.758
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian7g00546 7 13037945 13038421 Vian7g00546 7 13037945 13038421 ECH