Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian7g00540 ATGATGAAATCTATGTTTGAGTGTGGAAACCAAGATGCTAATGTTGATGATGGAGACCTTAATTGGAATAATGGTCATCTCCTACTGCAAGACATTCAAGAAATAAGCAAAGCCCTCTATGCTCCTTCTAGGCCTTCCTTTTCCTCTGTTCATAATCGATCCAAATCTGCGGGAAAAACCCGGTTGTCGAAATCTCAAGTTTCCTTAACCCCGGGATTTCTGAAGGATGATCTGTTGTCAAAGGACAAGAAGCTGTCTTCCGCGTGGAATTGGAAGAAGCCCTTGAAAGCTTTGACCCATATTGGTGATCAAAAGATCAAATGTTGCTTTAACCTTCATGTTCACTCAATTGAGGGTCTGCCTTTGAGTTTTGATAGCATTAGGCTGTGTGTGGTTTGGAAAAGAAAGAACAACATTTTGCAGACTCGCCCCTCAAGGGTTATCCAGGGTGTTGTGGAGTTCAATGAAACTATGAGTCATGGATGTTCTGTTTATTTTAGCCGCGCTGTCTCTGGTCATTCTCTCAAGTATGAGTCTAAGCGGTTCTTGATCTATGCCTTCATTGTGGGGGCACCAGAACATGAAATAGGGAGCCATCAGGTGGATCTCACTAGACTTTTACCTCTGACTTTGGCAGAGTTAGGGGGTGATAGAAGTTCAGGGAAATGGAGCACAAGTTTTAGGTTGGCAGGAAAAGCTGTGGGAGCTAGCCTAAATGTTAGTTTCAGCTATCAAATAGTGAAGGATGAGTTAACGCAATTTGGTGGTGATAATTTGAATGTTCTCAACCTTATTAATATGAAGCCAGGCAGGCGAAGCAGCACAAGTATGAATTTTGGTCCAGGCCCTTTTCATTCTGATGATGCGATTTTATCCCGGGAAGCATTGATGAATTCTGGCTCAAGTCTTTCCAAATCAATCAGTTTCCTTTATCAAAAACTTGATGAGGAGAACATCCATGATTCAGTACAGGCAGACTCGGAACATTTTGAACCACTTAAATCTCATGTCCTAGAATCAAAGTCACCTCAAGAATCAAATTTTGAAGCTGATGACACTGAATTTTCCATTATAGAACAAGTAGAAACATTGGAAGGGGATCCCTTGAAAACTGATCAGGCAGGAAATCAAACAGTTGATTTGTCAACAGTTGAAATCATTAATGTAGATGATATTATTAAGGATGATGACATATCTGTTGACAAGAACACAAGTTTTGATTCAATGGATGACATATACACTAGTTGTGTAAATGGAACTGTGGCAGGTGACAGCAAACATAAATGCAGTAGTTCGTGTCTCAGTTTAACTTGCATCAAGGATGTAGATATACTTCCTGAGACATCAGAATTTCTTGTCCAAGAGCACTACCCTAATGTTAAATCAAATTATAAATCACATAGAATGGCAAAAAAATCAAGTAGCTTGGATTCTATCACCGAATCTATTGCAAATGATTTCTTGAACATGCTGGCCATAGAGAGTGGTTCATTTGGCTCAAGTCGTGACGGGGATCCACATTCTCCCAGAGAGAAGCTTTTAATACAGTTTGAAAAGGAGGCTCTAGCTTCAGGTAACTTCACTTTTGATTTCAATGCAGACGAAGAGGAATTGAAGACAGAGACGCTTGGACATAGCTACGATGATTGTACTGTGGATTCTGATTTGTCTTTATTTATTCAAGCTGCTGAAGAGGAGCATGCCAGGGAGAATCAGTTGTTAATGCAGAGAAGAAAGGCCAAAATTTTGGAAGACCTGGAGACAGATTCATTGATGCAACTCTGGGGTTTAAATGAGAGGGACTTTGAAAATTCTCCGGGAACTTGTTCTGGTGGGTTTGGAAGTCCAATTGAACTACCCAATGAAGAATCATGCATGTTACCTTCAATTGGACAGGGACTTGGTTCATTTGTTCAAATTATGGGTGGAGGCTTCTTAAGGTCCATGAGTCCTTCCCTTTTCAAAAATGCTAAGAATTGTGGTAACCTCATCACTCAGGCTTCTAATCCTGTTGTTCTACCTGCAGAAATGGGTAATGATATACTGGATATACTGCAGCATGTGGCATCTGATGGAGTTGAAGAGCTGTGTCATCATATCTATAAATTGTTGCCTTTGCAAGATATCACTGGAAAATCCATTGAGCATATTTCGTGGGAAGCCATAACCAACAAAGGGACTCCTGGAAGGCAGAGGACATGGCAGCACGATTCCTTTGATGAATTTCATTGTAACTATTTGACAGATGAAGACATGAGCTTGGACATTGTATCTCTAGAAGCAATAGCTCCTATGACTGTTGATAAGATTGAATCCCTTTTGATAGAAGGGTTGAGAGTGCAGTCTGGCATGTTGTACGAGGAGGCACCATCTTATATGCATCCCCAACATGCAAAGACGCCTTTCATCGGTAGCAGAAGAGCCAACTGGAAATGGTTTCCCACATCAGAAAGAGGTGATAAAATGCAACTAGAAGATGGTGGAGAAATTGGTCATGATGATCATGGATTGATGGGTCTGTCAGTAACATTAGATCAATGGTTGAGATTGGATTCTGGCATTATTGAAGGAGATCAGAATTCAGAACAAATTTTGAAGATCTTACAAGTACACCATTCTAAAATCACAGAGTTACTGCATGATCGAGGGTTGAAAAATGCCATGGACCAGGTAAAAACATTTGGCAGAAAGCATGGACTCTTGGGGAACCACCTAACGGTGGCTTATATGATCCAGCTTAGGAATCCTCTACGAAATTATGAACCAGTTGGTGCTCCAATGCTGGTTTTGACTCAGGTGGAAAGGGTTAACATACATGTAATGCAGCAAGATGACAGCAATTTTCTGGAAAGAAAAGAAAAGGGAATGGAGAATGAGACCTTACTAAATGAAATAAGTGGCAAGTTTTTTGAAGATTCAAATACCGAAAATGAATCACCTCGATTTGGATTCAAAATCAGAGAGATTCATCTTTCAGGTGTCCTTACCAAATCCGGAAGCAAGCAACATTGGGGTACTGTAACTCAGCAACAGTCTGGGATCCGGTGGTTGCTTGCCAGTGGCATGGCTAGTACTGTCAAACATTCAACTTCAACATCAAAAGCAATTGTTTTGTCATCTCCGCTGTGTACCAAGAAGTTGCTGAATGAGGACACGCTCTGGAGCATTTCTTGTGTTAATAATAGTAAAGAGCTGCTTGCTGAAAATGTACACATCCGGAACCCTGATATCATCTTCCCAAGTTGA 3246 0.4076 MMKSMFECGNQDANVDDGDLNWNNGHLLLQDIQEISKALYAPSRPSFSSVHNRSKSAGKTRLSKSQVSLTPGFLKDDLLSKDKKLSSAWNWKKPLKALTHIGDQKIKCCFNLHVHSIEGLPLSFDSIRLCVVWKRKNNILQTRPSRVIQGVVEFNETMSHGCSVYFSRAVSGHSLKYESKRFLIYAFIVGAPEHEIGSHQVDLTRLLPLTLAELGGDRSSGKWSTSFRLAGKAVGASLNVSFSYQIVKDELTQFGGDNLNVLNLINMKPGRRSSTSMNFGPGPFHSDDAILSREALMNSGSSLSKSISFLYQKLDEENIHDSVQADSEHFEPLKSHVLESKSPQESNFEADDTEFSIIEQVETLEGDPLKTDQAGNQTVDLSTVEIINVDDIIKDDDISVDKNTSFDSMDDIYTSCVNGTVAGDSKHKCSSSCLSLTCIKDVDILPETSEFLVQEHYPNVKSNYKSHRMAKKSSSLDSITESIANDFLNMLAIESGSFGSSRDGDPHSPREKLLIQFEKEALASGNFTFDFNADEEELKTETLGHSYDDCTVDSDLSLFIQAAEEEHARENQLLMQRRKAKILEDLETDSLMQLWGLNERDFENSPGTCSGGFGSPIELPNEESCMLPSIGQGLGSFVQIMGGGFLRSMSPSLFKNAKNCGNLITQASNPVVLPAEMGNDILDILQHVASDGVEELCHHIYKLLPLQDITGKSIEHISWEAITNKGTPGRQRTWQHDSFDEFHCNYLTDEDMSLDIVSLEAIAPMTVDKIESLLIEGLRVQSGMLYEEAPSYMHPQHAKTPFIGSRRANWKWFPTSERGDKMQLEDGGEIGHDDHGLMGLSVTLDQWLRLDSGIIEGDQNSEQILKILQVHHSKITELLHDRGLKNAMDQVKTFGRKHGLLGNHLTVAYMIQLRNPLRNYEPVGAPMLVLTQVERVNIHVMQQDDSNFLERKEKGMENETLLNEISGKFFEDSNTENESPRFGFKIREIHLSGVLTKSGSKQHWGTVTQQQSGIRWLLASGMASTVKHSTSTSKAIVLSSPLCTKKLLNEDTLWSISCVNNSKELLAENVHIRNPDIIFPS 1081
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian7g00540 1081 ProSiteProfiles C2 NT-type domain profile. 98 246 IPR019448 -
Vian7g00540 1081 Pfam N-terminal C2 in EEIG1 and EHBP1 proteins 104 248 IPR019448 -
Vian7g00540 1081 PANTHER PROTEIN PLASTID MOVEMENT IMPAIRED 1-RELATED 1 23 1080 IPR039614 -
Vian7g00540 1081 MobiDBLite consensus disorder prediction 44 63 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian7g00540 Vian-Chr7 12993196 12996536 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian7g00540 - - gmx:102659940 1667.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian7g00540 7 12993196 12996536 Vian7g00540 7 12993196 12996536 ECH