Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian7g00530 ATGGGTGAGAACACTGACGTTACCGTCACCACCAAAGCCAAAACCAAAATCCTTCTCTATCTTCTAACAGAACCAATCCAATGGCTGCAAATGCTGTCCTCAAAGCTAAACCCTTCCTTCGTCATCGGCGTCTTCCTCATCTACGGTTTAGGGCAAGGGCTCTCGGGCTCACTCTTCAAGGTAGTGGCAGACTACTACTGGAAAGACGTGCAGAAGCTTCAACCCTCCACCGTTCAACTCTTCGTAGGTGTTTACTTCATCCCCTGGGTTCTCAAACCTCTCTGGGGAATCCTCACCGACGCCTTCCCCGTTAGAGGATACCGTCGCCGACCCTACTTCATCATCTCCGGTGTGATCGGCACCGTCTCCGCCGCCACTGTCGCGCTCACCGGGAACCTCACCGCCACAGCCGCGCTCATTTGCTTCCTCGGCGTGTCGGCGTCGCTCGCGATCGCGGATGTCACAATCGATGCGTGTATTGCGAGGAACAGCATCGAGGTGAGGGAGCTGGCGCCGGACTTGCAGAGCCTCTGCGGGTACTGCTCCGGCGCCGGCGCCCTCGTCGGATACCTCGCGAGTGGGTTCTTCGTGCACCGCCTCGGACCCCAGGAGTCGCTTGGTCTCTTGGCGCTTTCTCCTGCTTTGACGATTGTGCTGGGTTTTGTGATTTATGAAAACAGAACTTCGCATATTGAAAAGAAACAGGCAGTGATGAAGAATGTAGGAACGACTATCAGAAGCATGTTCAAGACAATTAGGTATCCTCAAGTGTGGAAGCCTTCTCTGTTCATGTTCCTTTCCCTGGCTTTGAATGTAACCACCCACGAAGGCCATTTTTATTGGTATACAGATCCAAAACTTGGCCCTGCATTCTCTCAGGAGTTTGTAGGGGTGATCTATGCAATCGGTGCAGTGGCATCATTGATAGGGGTTTTAATCTACCACAAGACTCTCAAAGACTACGCATTCAGAGACCTGGTATTCTATGCACAACTCCTATATGGGATATCTGGTGTGCTGGATCTGATCTTCATCCTCCGTTGGAACTTGATCATTGGAATCCCTGACTACTTCTTTGTTGTCATTGAAGAAAGTGCTTCAAAAATTACAGGCAAAATCAAATGGATGCCCATGATGGTGCTGAGCACCCAGTTGTGCCCTTTAGGCATTGAGGGCACATTTTTTGCTCTGCTAATGTGCATTGATAGCATGGGTGTCCTCTTATCCAGGTGGGGTGGAGGGTTGCTGCTTCGTCTTCTCCACATTACCAGAACTGACTTCACAAACCTTTGGTTGGCTGTTCTCATAAGGGATATGCTCAGGTTTTCAATACTTGCTTTGGTTTTTCTTGTCCCTAAAACAGGTCAATATGAGGAACTGCTTCCTTCTGATGTTTCAGAAAATAACACAGTTCATGATGTAGATGAAGAGAATTTGGAACTTCTCCCTTTCAATGGAAAGACTGAACTTTAG 1473 0.4922 MGENTDVTVTTKAKTKILLYLLTEPIQWLQMLSSKLNPSFVIGVFLIYGLGQGLSGSLFKVVADYYWKDVQKLQPSTVQLFVGVYFIPWVLKPLWGILTDAFPVRGYRRRPYFIISGVIGTVSAATVALTGNLTATAALICFLGVSASLAIADVTIDACIARNSIEVRELAPDLQSLCGYCSGAGALVGYLASGFFVHRLGPQESLGLLALSPALTIVLGFVIYENRTSHIEKKQAVMKNVGTTIRSMFKTIRYPQVWKPSLFMFLSLALNVTTHEGHFYWYTDPKLGPAFSQEFVGVIYAIGAVASLIGVLIYHKTLKDYAFRDLVFYAQLLYGISGVLDLIFILRWNLIIGIPDYFFVVIEESASKITGKIKWMPMMVLSTQLCPLGIEGTFFALLMCIDSMGVLLSRWGGGLLLRLLHITRTDFTNLWLAVLIRDMLRFSILALVFLVPKTGQYEELLPSDVSENNTVHDVDEENLELLPFNGKTEL 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian7g00530 490 PANTHER FOLATE-BIOPTERIN TRANSPORTER 1, CHLOROPLASTIC 25 458 IPR039309 -
Vian7g00530 490 Pfam BT1 family 52 236 IPR039309 -
Vian7g00530 490 Pfam BT1 family 257 454 IPR039309 -
Vian7g00530 490 NCBIfam folate/biopterin family MFS transporter 24 464 IPR004324 GO:0016020
Vian7g00530 490 SUPERFAMILY MFS general substrate transporter 42 435 IPR036259 -
Vian7g00530 490 CDD MFS_FBT 43 449 - -
Vian7g00530 490 Gene3D MFS general substrate transporter like domains 31 451 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian7g00530 Vian-Chr7 12882568 12885034 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian7g00530 - - gmx:100806186 808.905
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian7g00530 7 12882568 12885034 Vian7g00530 7 12882568 12885034 ECH