Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian7g00502 ATGGAACACAGTTTGAAAAGAAAGTCTCCAGAAAATGAAGACTTTTTACACTTGAACGGCTTTTCTCTGGATGACCTTAATGAAGATCTCTTAGAGAGGGTGCTTTCATGGCTACCAACTTCCTCCTTCTTCCGCCTTACTTCTGTCTGCAAGAGATGGAAGTCAGCTGCTGCTTCTTTGAGTTTCAAGCTTGCCTGCTCACACATTCCCTCGAGAGATCCTTGGTTTCTGATGGTTTCTCCCAGCCTCAACCAATCCATTGTCTTTGACACTGCTGAAAACAGTTGGAAAAAACTCAATCACTTGCGTCTTCCTCTCGAAGACTCTAACATAAGCTGCATGCCTGTTGCAGCATCTGGTGGCCTGGTTTGCTACCGCAAACTCTCAGGAAACTTTGTTGTATGCAATCCAGTAACCGGATCCTGTAGTGAACTCCCTCCATTGCATTTCCCCTCAGAAAATCAGCCTCTCAATGCCGTTGTGATGAGTACAACTTTCAGAGATCAAATCTCCTACAAGATTGTGTTAGTCTTCGGTGAACTCCCTAATCTTTTGTTCAAAGTCTATGACTCAAGCTCTTGCTGTTGGGAAGATGAGACTGCTCTTAGGAGGGAGGTGGATGACAATTCCATTGATTGTGATTCAACCGATGATGATGACAATGTTGTGTACTTCCTTAGTAAGGCTGGAACGGTGGTGGCAAGTAGCATGCAGAGGAGCCCATCTAAGCAATATTCCTCGGTCATTACCACCAAAGATGGTGAGGAAATGGTGTATTTCCTCAGCTCCTCAGGGACAGTAGTAGCTTGCAATTTGACATCCAAGTGCTTTTTTGAGTATCCGAGGTTGTTGCCTGTTTTCAGTGAGTACTCCATTGACATTGTGGAGTGTGGTGGTGAGATGCTGGTTGTCTTGTTATCAGAATTCTTGGAGAGCACAAGTCTTAGGGTGTGGAAATACGATGACACAAATAGATGCTGGCAACAGATTGCTGCAATGGCTGCAGCAATGTCTCAAGAATGGTATGGAAAGAAGGCAGATATTAACTGTGTTGGTGCTGGCCATCAGATACTTATATGCTTGAACTCTCCTGAGCTATGCACTTATGTTCTCTGTGATTTGGTGACCAACACATGGACAGAATTGCCGAAATGTTGCATGAATGGAGAAGTCATGGAGTTCATGTCTGCATTTTCATTTGAGCCCAGGATAGAGGCTTGTGTATGA 1227 0.4434 MEHSLKRKSPENEDFLHLNGFSLDDLNEDLLERVLSWLPTSSFFRLTSVCKRWKSAAASLSFKLACSHIPSRDPWFLMVSPSLNQSIVFDTAENSWKKLNHLRLPLEDSNISCMPVAASGGLVCYRKLSGNFVVCNPVTGSCSELPPLHFPSENQPLNAVVMSTTFRDQISYKIVLVFGELPNLLFKVYDSSSCCWEDETALRREVDDNSIDCDSTDDDDNVVYFLSKAGTVVASSMQRSPSKQYSSVITTKDGEEMVYFLSSSGTVVACNLTSKCFFEYPRLLPVFSEYSIDIVECGGEMLVVLLSEFLESTSLRVWKYDDTNRCWQQIAAMAAAMSQEWYGKKADINCVGAGHQILICLNSPELCTYVLCDLVTNTWTELPKCCMNGEVMEFMSAFSFEPRIEACV 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian7g00502 408 PANTHER BNACNNG10540D PROTEIN 254 407 - -
Vian7g00502 408 Gene3D - 17 63 - -
Vian7g00502 408 CDD F-box_AtFBW1-like 24 62 - -
Vian7g00502 408 FunFam F-box only protein 13 18 63 - -
Vian7g00502 408 SUPERFAMILY Galactose oxidase, central domain 86 383 IPR011043 -
Vian7g00502 408 SUPERFAMILY F-box domain 19 103 IPR036047 GO:0005515
Vian7g00502 408 ProSiteProfiles F-box domain profile. 20 65 IPR001810 GO:0005515
Vian7g00502 408 Gene3D - 75 389 IPR015915 GO:0005515
Vian7g00502 408 SMART fbox_2 26 66 IPR001810 GO:0005515
Vian7g00502 408 Pfam F-box domain 23 62 IPR001810 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian7g00502 Vian-Chr7 12364212 12365438 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian7g00502 - - vun:114195471 776.933