Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian7g00500 ATGGAGGAACAACACCACCAACAACCTAAACCCAACAACATCAACGCTTCCGACGTCGACCCTTTCCTCTTAAACTACACACCTTCGGATCTCCGAACCGCTTCGGAGTTTCTCGCCACTTGGCTCCCCTTCCTCTCCCGAGATCTCTGCGCTCGCTGCACTCAATCTCTCTCCGATCGTATTCAATCCATCGACCCAGGTGAAGTGCCCCAAAACGGCAGCCCCAATGAACAAAACGACGCTGAAGATAACTGCGACACGCATTCGCTGGGGAGTTGGAAAGACGGGGCGGAGGTGAATTCCTGTGTGGAGACTCCGAGCCAGAGAGTTTGTTGGGCCGACATGGCCCAAGAGGATGATGAGTTTGGTGAAGAAGAAAACAACAACAATGGGGTTAATGTTGTTATGGGTAATTCGAATGATGCTTCTGATGTGGGTGTGGCTGTGGCTGAGAAGCCTACTTTGCCTAGGGAGCAGAGGGAGTACATTAGGTTCATGAATGTGAGGCGCAAGAAGGACTTTATCTGCTTTGAGAGGGTTAATGGGAAGCTTGTGAATATTCTTGAAGGGCTTGAACTCCACACAGGGATTTTCAGTCTTGCTGAACAAAAAAGGATTGTCAATTATGTTGCTTCATTACAGGAGATGGGGAAAAGAGGAGAATTGAAAGAGCGGACATTTTCTGCTCCCCAAAAGTGGATGAGGGGCAAGGGACGACAAACCATACAATTTGGGTGCTGTTACAATTATGCAGTGGATAGAGATGGTAACCCACCTGGTATTCTTCCACATTCAATGGTTGATCCTTTACCTGATCTTTTCAAAGTCATCATCCGACGACTGATCAAGTGGCATGTACTACCTCCTACTTGTGTGCCAGACAGTTGCATTGTTAATATATATGAAGAAGGGGACTGTATACCTCCACACATAGATAACCATGACTTTGTTCGACCATTTTGCACTGTCTCATTTCTTAGCGAGTGCAATATAGTTTTTGGATCAAACTTGAAGATTGTAGGTCCTGGTGAATTTGATGGTTCGATTGCTATTCCATTGCCTATGGGATCTGTACTTGTCTTGAATGGAAATGGAGCTGATGTAGCTAAGCACTGTGTGCCAGCAGTTCCTGCAAAAAGGATATCGATCACATTTAGAAGAATGGATGAGTCAAAGAGGCCTTTTGGGTATGTTCCTGAACCTGATCTGCAGGGAATCCAGCCATTGACATATGAAGTTGAGCAGGAAAAGAAATCAGGTGGACACAGATCTGGTCGTCATGTGAGGAGACAAAGAGGGAGAGGAGGTGGCAGGAATGATGCAATGGGATTTGCATCTAGAAATGATAGGTTCTCAGAGCACCGCGACTCGAATCATAATACACCCAGATCGGGAAATAGGTGGAGTAGAAAGCTTGGTAGTTGA 1425 0.4618 MEEQHHQQPKPNNINASDVDPFLLNYTPSDLRTASEFLATWLPFLSRDLCARCTQSLSDRIQSIDPGEVPQNGSPNEQNDAEDNCDTHSLGSWKDGAEVNSCVETPSQRVCWADMAQEDDEFGEEENNNNGVNVVMGNSNDASDVGVAVAEKPTLPREQREYIRFMNVRRKKDFICFERVNGKLVNILEGLELHTGIFSLAEQKRIVNYVASLQEMGKRGELKERTFSAPQKWMRGKGRQTIQFGCCYNYAVDRDGNPPGILPHSMVDPLPDLFKVIIRRLIKWHVLPPTCVPDSCIVNIYEEGDCIPPHIDNHDFVRPFCTVSFLSECNIVFGSNLKIVGPGEFDGSIAIPLPMGSVLVLNGNGADVAKHCVPAVPAKRISITFRRMDESKRPFGYVPEPDLQGIQPLTYEVEQEKKSGGHRSGRHVRRQRGRGGGRNDAMGFASRNDRFSEHRDSNHNTPRSGNRWSRKLGS 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian7g00500 474 MobiDBLite consensus disorder prediction 61 87 - -
Vian7g00500 474 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 292 389 IPR005123 -
Vian7g00500 474 MobiDBLite consensus disorder prediction 61 80 - -
Vian7g00500 474 MobiDBLite consensus disorder prediction 414 474 - -
Vian7g00500 474 MobiDBLite consensus disorder prediction 447 461 - -
Vian7g00500 474 SUPERFAMILY Clavaminate synthase-like 187 388 - -
Vian7g00500 474 Gene3D - 175 393 IPR037151 -
Vian7g00500 474 Pfam 2OG-Fe(II) oxygenase superfamily 192 386 IPR027450 -
Vian7g00500 474 PANTHER HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY PROTEIN-RELATED 29 422 IPR044842 GO:0003729|GO:0006402|GO:0032451
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian7g00500 Vian-Chr7 12346810 12350121 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian7g00500 K10767 - gmx:100797674 783.867