Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian7g00471 ATGTCCCTCCAAACACTCATTTTCACATCCCTTTTGGTTCTATTCATGAGTGTCCATTCTCAAGCTCTTCTCGACCCTTCTAATCGGAAATATGCACCAAGCAAGGCAAGTGTTAGAGCTGCGTATTGGCCTTCGGGTGATGATCTTTCGCCTTCTTCCATCGACACAAAGTACTACACTCACATCTACTATGCTTTCATCCAACAAGACCCTCAATTTTTCCACCTTAGCGTCGCCGAATCCGAGAAAAAATGGATTCCACAATTCATCAACGGGCTCCGCCACCGTTACCCGCCTGTCAAAACTCTCTTGTCGATTGGCGGAGGTGGCAGCAACTCCACCGCCTTCTCCCTCATGGCCAGCACCCAACACAACCGACAAGTGTTCATCAACTCCACCATCCACGTGGCGCGCCAATTCGGATTCGACGGCCTCGATTTGGACTGGGAGTTCCCAGAAAACGAGGTCGACATGTCTAACCTAGGTATCTTGTTTCGTGAATGGCATCAAGCTATTACATTGGAAGCACAAGCTTGCAGAAAACCGCGTCTGCTTTTAACCGCCGCTGTTTATTACGCTTCCACCATTAAACTTATCGGTAATGGGCCAAGAACATATCCGGTTCAGGCCATTCGCAAGTACTTGGATTGGGCCAGCCCAATGTGCTTTGACTACCATGGGACTTGGGACAATTTTACAGGCTTCAATGCTGCTTTGTATGATCCAAACTCCAACATCAGTACCCGGTACGGAATCGGGTCTTGGATCGGATCGGGTGTGCCCGCGGGGAAGTTGGTTATGGGTTTACCATTATACGGACGGGCATGGGCTCTCCAAGACCCGAATGTTCATGGGGTCGGAGCAGAGGCTGTTGGGGAAGCCACTGATACTGATGGTACAATGGATTATGATGAAATTTTGGTGTTCAACAAAGAAAATGGTGCCACTGTTGTGTACGATGATGTAGCCGTGGCTTTCTACTCTTATGCGGGTACTACTTGGATCGGGTATGACGATGGAGCATCCATAACGAAGAAGGTTCGGTTTGCTAGGGCTTGGAGCTTGAAAGGCTATTTCTTTTGGGCTATCGGAAAGGATAAGGATTGGACCATCTCGAGACAAGCTTCAAATGCATGGGGACATTGA 1146 0.4869 MSLQTLIFTSLLVLFMSVHSQALLDPSNRKYAPSKASVRAAYWPSGDDLSPSSIDTKYYTHIYYAFIQQDPQFFHLSVAESEKKWIPQFINGLRHRYPPVKTLLSIGGGGSNSTAFSLMASTQHNRQVFINSTIHVARQFGFDGLDLDWEFPENEVDMSNLGILFREWHQAITLEAQACRKPRLLLTAAVYYASTIKLIGNGPRTYPVQAIRKYLDWASPMCFDYHGTWDNFTGFNAALYDPNSNISTRYGIGSWIGSGVPAGKLVMGLPLYGRAWALQDPNVHGVGAEAVGEATDTDGTMDYDEILVFNKENGATVVYDDVAVAFYSYAGTTWIGYDDGASITKKVRFARAWSLKGYFFWAIGKDKDWTISRQASNAWGH 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian7g00471 381 SMART 2g34 37 366 IPR011583 GO:0008061
Vian7g00471 381 CDD GH18_plant_chitinase_class_V 38 372 - -
Vian7g00471 381 ProSiteProfiles Glycosyl hydrolases family 18 (GH18) domain profile. 37 381 IPR001223 GO:0005975
Vian7g00471 381 Gene3D - 271 337 IPR029070 -
Vian7g00471 381 FunFam Class V chitinase CHIT5b 271 337 - -
Vian7g00471 381 ProSitePatterns Glycosyl hydrolases family 18 (GH18) active site signature. 142 150 IPR001579 GO:0004553|GO:0005975
Vian7g00471 381 Gene3D Glycosidases 52 367 - -
Vian7g00471 381 PANTHER CHITINASE 26 379 - -
Vian7g00471 381 SUPERFAMILY Chitinase insertion domain 272 337 IPR029070 -
Vian7g00471 381 Pfam Glycosyl hydrolases family 18 41 366 IPR001223 GO:0005975
Vian7g00471 381 SUPERFAMILY (Trans)glycosidases 38 378 IPR017853 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian7g00471 38 379 Glycoside Hydrolase AT4G19810 43.895 1.48e-96 291
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian7g00471 K01183 - gmx:100787511 676.396