Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian7g00428 ATGTCCCACCACCAAACCACCCTCATGCTGCCCAATCCCACCACCTCTTCCCGCTCCTCCTCCGCCTCCTCCTCCCCTCTCCCACTCATCCACGCCATCTTCGCCAGAAAAAGCCTCTTCTACCACCGCCTTCCCTCCCAACCCCTCCGACTCTCCGTCCTCAAGCTCGATGGCTCCTCCTTCCATATTCAGGTTTCCAAGACCGCCACTGTTGCCGAACTCAAAGACGCAGTCGAGGCTGTCTTCTCCCACGCGCCTCTCAAGGGTCCCGCCAAAATTTCATGGGCGCATGTTTGGGGGCAGTTTTGCTTATGCTATGATGGACAGAAGCTAGTTACCGAGAATGATTATCTTCGAAACTATGGGATCAAGGATGGTGACCAGCTTCGTTTCATCCGCCATGTTTCAAACAATTGCTGTGTCCAAAGAAAGCGGTTGAAGAAAAGAATTGTCTATTTGAAACAGCAGAGGAGGTGCAGGTCTTCCCCAGTGGATAGCTATCAAGACAAAAGAAAGAGTGATAGTGACGAGATTGGTTCTGATGATGAAGCCACGGATAATGAGAAGCATGACACCGAAGAAGTAGAAGAGCGTGTTGTAAAGAACAAATTTGCTGGCTTTGTGGGAGAGTTGTTCTCTTACACTCCACTGGCAGTTGTGAGAAGAACTACAACTAAAAGCAGGATTTGGCCATCAACTATTCCCAGATGTTTGGTGGGTAGTTTTAGAAAGATTAAAAGTATTGTATGCTTTGGCAGGAGAAGGCCCTATTCTCGGAGACTTACATGGAGACATATGGGTTAA 804 0.4863 MSHHQTTLMLPNPTTSSRSSSASSSPLPLIHAIFARKSLFYHRLPSQPLRLSVLKLDGSSFHIQVSKTATVAELKDAVEAVFSHAPLKGPAKISWAHVWGQFCLCYDGQKLVTENDYLRNYGIKDGDQLRFIRHVSNNCCVQRKRLKKRIVYLKQQRRCRSSPVDSYQDKRKSDSDEIGSDDEATDNEKHDTEEVEERVVKNKFAGFVGELFSYTPLAVVRRTTTKSRIWPSTIPRCLVGSFRKIKSIVCFGRRRPYSRRLTWRHMG 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian7g00428 267 Gene3D - 44 142 - -
Vian7g00428 267 CDD Ubl_SNRNP25 49 134 IPR040610 -
Vian7g00428 267 PANTHER U11/U12 SMALL NUCLEAR RIBONUCLEOPROTEIN 25 KDA PROTEIN 15 249 IPR039690 GO:0000398|GO:0005689
Vian7g00428 267 SUPERFAMILY Ubiquitin-like 45 140 IPR029071 -
Vian7g00428 267 Pfam Ubiquitin-like domain 49 135 IPR040610 -
Vian7g00428 267 MobiDBLite consensus disorder prediction 163 195 - -
Vian7g00428 267 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian7g00428 Vian-Chr7 11143846 11146465 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian7g00428 - - gmx:100820296 398.282
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian7g00428 7 11143846 11146465 Vian7g00428 7 11143846 11146465 ECH
Vian4g01981 4 36434108 36434755 Vian7g00428 7 11143846 11146465 ECH
Vian7g00428 7 11143846 11146465 Vian4g01981 4 36434108 36434755 PCT