Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian7g00402 ATGCGACGCACTCCTCCCTCCCTCCATTTCCTCTCCGCCACTGACACCGCTACCGCCACTGCCGCAAATACAGCAGCAGCCACCGCCGCCTCGATGTCTTCACTCCCATCCCATCGAGGGCGCGGTAGGGGCTTCTCTAGCCGACCGTACTCCGGCGGCAGAGGTCACTTCGTCTCCGGCGATGCGCACTTAAGGTCTGTCCGCGACGTCAATTTAGGTCTCCGGCGAGGTGAGAGTGGAAGCTTCGCGAACCAAACGGTGCATAATCAGAATCCCCCGTATAATCCGAGGCCTCATCCGCCGCCGCTTCACCATGAGCGGCCTCAGTTCCATAATCGACCGTATTCCCCGCCCTTTCCGCCACATTTCCCGCAGTACCGGCTACATCCTCCACCTGAGCACCGGCCGACGTTTCGTCCGCAGACGCATCTCCGGCAGCGGCCCCCGGATTATCGGGACTGGGAGCCTTCCCTGACGCCGCCTCCTCCTCATTGTGAGCGGTTTAAAGTTCTTTCCTATAATATATTGGCTGACTACCTTGCTTTGGACCACCGGAACAAACTTTATTTTCACATACCTCCATACATCTTGGACTGGCAGTGGAGAAAGAGAAGCATACTTTTTGAGTTGGGGCTGTGGTCAGCTGATATCTTGTGTTTACAGGAGGTTGATCGATTTCATGAGTTGGCTGAGGAGTTGCAGCCTAAGGGATACAGTGGCATCTGGAAGATGCGTACAGGTAATCCAGTTGATGGCTGTGCAATATTTTGGAAAAAATCAAGGTTCAATTTGTTATATGAAGAATTCATTGAGTTTAATAAGCTGGGACTCAGGGACAATGTCGCTCAGCTATGTGTACTGGAGGAACAGGAACATAGACCTGTGGTTGTCAGAAATGGCCAGGCTCAGCCACAATATTGGCAAGCTGTGGAGAGCACTGGGCATCCTACAGAAGCCTCAAGCCACTCTGCTCTGATATGGTGGGGAGAAATTAAGCTTGGCCAGGTTCGCGTGCTACTTGATAAGGCTAAAGCTGTTTCTAAACTCTGGAATGATGCCCCTATAGTTATCTGTGGGGATTTTAATTGTACACCCAAGAGTCCGTTATACGACTTTATATCGGAACAGAAGTTAGATCTATCCGGAATAGATAGGAATAAGGTATCAGGACAAGCTTCTGCAATTCCTGCATCAAAGCCCTATTATGGTCCTAATTCTGGTGAAATATCTGCTACTGGTTCAGTTCAGGCTATATCCACTGAAGGTGTCAAGGAAGTTACTGAACAAAATAATTATCGATTGGACACGACAGACCTGGACACTTTAGATAATCAGTATACTCACTCAGATTTGGATATGTCTGTTAAGTCTTGTGCACATGTTGAGTGTGGAAAGGAAAATGATTCATATCCTGGAAAAGATACTCAGGAAACTGCTGTTGACCATTTGAAGATCTTTCGCGAAGTTGGTAGCATAGAAGAACAAGATGCTTCATATAGTAATGGTGGGCTCCATAATGTTCCTGTAAATGGTGATGGTCATGACATTACACCTGTGACCTCTTCAGCTCCTGAAGCTGTTAACAGTGAAAAATCTGGGTTGGGAAGCAATGAACATATACCAGATGCTGTCCCAACTTCAAATGAAGAATTAAGCAAAAAATCCAACTTACATGTCCCTGAAGAGAATAAACTGGTGGAGTTTGACTGTTCCCCAACTTCTCTTCAGGAATGTCATCAATCTTTCACAAGGGTGAGGATTGATATTGAGTCAAAAGATCTTGACAATGCAGTAATTTCTCCAACCAAACGATCCAGCCAAACTTCAGCTTCCAATACATTGGAAGTCCCTAGTACAGAGTCTGATAAAACCATTGGTGAAAATATTGGTGATGACAGCAGTTTTGTATCTTCCTTACATAATGCTGAAGGAGTTGCTCTTGACATCAGTTCATCAATGAAATCAGATCTTGATAAGTCCTATCAGTACACGAAATTAAATTCTGCTTCCAATTTGTTGCCTGTAGAAGCCAATGAAGGGGAGGATAAGTTGTCTCCTCGTCAGATTTCTAAATCTATTTGGCAAGGGGAGGCTACTTATAATCCTGCATTGTGGACCCCTAAGGAGATAGAAACTGCAACAGGAAATGAAGAATGCACCTTCTTGGAGCACTCTTTACAGCTTAGGAGCACATACACCGAGGCAATGGATTGTTCAGGGACCAGAGACCCCTACGGAGAACCCCTTGTGACAAGTTATCATAGGCGCTTCTCAGGAACTGTTGATTACATTTGGCGATCTGAAGGTCTTCAAACAACTAGAGTTCTTGCTCCGATGGCTAAACATGCCATGGAATGGACTCCAGGATTCCCAACCAAGAAATGGGGCAGTGATCATATTGCATTGGTGACCGAGCTGGCTTTCATGAAAGATGGTACCGACATCTCCACCGAGGTTTAA 2460 0.4634 MRRTPPSLHFLSATDTATATAANTAAATAASMSSLPSHRGRGRGFSSRPYSGGRGHFVSGDAHLRSVRDVNLGLRRGESGSFANQTVHNQNPPYNPRPHPPPLHHERPQFHNRPYSPPFPPHFPQYRLHPPPEHRPTFRPQTHLRQRPPDYRDWEPSLTPPPPHCERFKVLSYNILADYLALDHRNKLYFHIPPYILDWQWRKRSILFELGLWSADILCLQEVDRFHELAEELQPKGYSGIWKMRTGNPVDGCAIFWKKSRFNLLYEEFIEFNKLGLRDNVAQLCVLEEQEHRPVVVRNGQAQPQYWQAVESTGHPTEASSHSALIWWGEIKLGQVRVLLDKAKAVSKLWNDAPIVICGDFNCTPKSPLYDFISEQKLDLSGIDRNKVSGQASAIPASKPYYGPNSGEISATGSVQAISTEGVKEVTEQNNYRLDTTDLDTLDNQYTHSDLDMSVKSCAHVECGKENDSYPGKDTQETAVDHLKIFREVGSIEEQDASYSNGGLHNVPVNGDGHDITPVTSSAPEAVNSEKSGLGSNEHIPDAVPTSNEELSKKSNLHVPEENKLVEFDCSPTSLQECHQSFTRVRIDIESKDLDNAVISPTKRSSQTSASNTLEVPSTESDKTIGENIGDDSSFVSSLHNAEGVALDISSSMKSDLDKSYQYTKLNSASNLLPVEANEGEDKLSPRQISKSIWQGEATYNPALWTPKEIETATGNEECTFLEHSLQLRSTYTEAMDCSGTRDPYGEPLVTSYHRRFSGTVDYIWRSEGLQTTRVLAPMAKHAMEWTPGFPTKKWGSDHIALVTELAFMKDGTDISTEV 819
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian7g00402 819 MobiDBLite consensus disorder prediction 30 59 - -
Vian7g00402 819 Pfam Endonuclease/Exonuclease/phosphatase family 171 381 IPR005135 GO:0003824
Vian7g00402 819 PANTHER CARBON CATABOLITE REPRESSOR PROTEIN 4 104 808 - -
Vian7g00402 819 SUPERFAMILY DNase I-like 156 379 IPR036691 -
Vian7g00402 819 MobiDBLite consensus disorder prediction 525 549 - -
Vian7g00402 819 MobiDBLite consensus disorder prediction 81 158 - -
Vian7g00402 819 MobiDBLite consensus disorder prediction 113 127 - -
Vian7g00402 819 Gene3D Endonuclease/exonuclease/phosphatase 141 447 IPR036691 -
Vian7g00402 819 Gene3D Endonuclease/exonuclease/phosphatase 650 817 IPR036691 -
Vian7g00402 819 MobiDBLite consensus disorder prediction 600 627 - -
Vian7g00402 819 MobiDBLite consensus disorder prediction 128 152 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian7g00402 Vian-Chr7 10675009 10692531 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian7g00402 - - vun:114194208 1271.91