Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian7g00372 ATGGAAGGGATGAAGCTTGAAAGGTGGCTCACAAGTGTTTTGTTCCTCATTGTTGCCACAGTGAGCAATGCATTAGGTGCATTTGTGGGGGTAAACATTGGCACTGATGTTACTGATCTTCCATCTGCTTCAAATCTGGTTGCTATTCTGAAAGCACATCAAATTACACATGTGCGTCTGTATGATGCCAACGAACACATGCTACAAGCACTTTCAAAAACTGGCATTGAAGTAATTGTTGGTGTCACAGATGAAGAGATACTAGGCATTGGAGAATCTGCATCAGTTGCTGCAGCTTGGATTAGTAAGAATGTGGCTGCATACATGCCATTTACTAACATCACAGCAATATCAGTAGGTAGTGAGGTTCTCACCTTAGTCCCAAAAGTTGCACCTGTTCTTGTTCCTGCCATGAACCATCTGCACAAAGCACTTGTTGCTTCAAACCTTAACTTTAGGGTTAAGATTTCAACGCCACAGTCCATGGATATAATTTCCAGGCCTTTTCCTCCTTCCACGGCCACCTTTAACTCCTCATGGAACTCCACAATCTACCAGCTCCTTCAGTTTTTGCAGAACACAAATTCCTCTTACATGTTAAATGCCTACCCTTATTATGGATACACTAGAGGAGATGGCATTTTCCCTATTGAATATGCTCTATTCAGACCCCTTTCTCCAGTGAAGCAAATTGTTGACCCAAACACACTGTTCCATTACAATAGCATGTTTGAGGCCATGGTGGACGCTACCTATTATGCCATAGAAGCCTTCAATTTCAATAATATACCTATTGTTGTCACAGAAACGGGTTGGCCTAGTTTTGGTGCAGTAAATGAACCAGATGCTTCTGAAAAGAATGCTGAGACCTACAATAATAATTTAATTCTGAGAGTACTCAATGGTTCAGGACCCCCTAGTCAGCCAAAGATAGCCCTTAATACATACGTATATGAGTTATTTAATGAGGACAAGAGAAAAGGGCCTGTATCAGAAAAGAATTGGGGTTATGGGTCCTGTATATATGCGGGAAGTGCTAACTCGAGCTTTGGTGGAAGAAGTTCATCTTCTGCAGCAATTGGACTTGGACCTGTAAGTCCTGTAGGAGTTGGAGCTGGTTTGAACCTGCAAGTGTCCACCTTTCAGTATTTGATATCGTCTATTAGTGTTCTTTTTGCTTTAATGATGTTATGA 1194 0.4154 MEGMKLERWLTSVLFLIVATVSNALGAFVGVNIGTDVTDLPSASNLVAILKAHQITHVRLYDANEHMLQALSKTGIEVIVGVTDEEILGIGESASVAAAWISKNVAAYMPFTNITAISVGSEVLTLVPKVAPVLVPAMNHLHKALVASNLNFRVKISTPQSMDIISRPFPPSTATFNSSWNSTIYQLLQFLQNTNSSYMLNAYPYYGYTRGDGIFPIEYALFRPLSPVKQIVDPNTLFHYNSMFEAMVDATYYAIEAFNFNNIPIVVTETGWPSFGAVNEPDASEKNAETYNNNLILRVLNGSGPPSQPKIALNTYVYELFNEDKRKGPVSEKNWGYGSCIYAGSANSSFGGRSSSSAAIGLGPVSPVGVGAGLNLQVSTFQYLISSISVLFALMML 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian7g00372 397 Pfam Glycosyl hydrolases family 17 29 336 IPR000490 GO:0004553|GO:0005975
Vian7g00372 397 FunFam Glucan endo-1,3-beta-glucosidase 3 28 342 - -
Vian7g00372 397 ProSitePatterns Glycosyl hydrolases family 17 signature. 263 276 IPR000490 GO:0004553|GO:0005975
Vian7g00372 397 SUPERFAMILY (Trans)glycosidases 29 336 IPR017853 -
Vian7g00372 397 Gene3D Glycosidases 28 339 - -
Vian7g00372 397 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 19 336 IPR044965 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian7g00372 Vian-Chr7 10069898 10072301 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian7g00372 4 336 Glycoside Hydrolase AT3G13560 67.568 5.29e-169 481
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian7g00372 K19892 - gmx:100786558 626.706