Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian7g00367 ATGGCTCCTCCCAGAGGTCGTGGTGGTGGTGGAGGTTTCAGGGGTGGTAGGGGTGACAGAGGTAGAGGAAGGGGCGGTGGTGGAAGAGGAGGAGACAGGGGTACGCCATTTAAAGCTAGAGGTGGTGGGAGAGGAGGAGGCAGGGGTGGTGGACGTGGAGGAGGTAGAGGTGGTGGCCGTGGTGGAATGAAGGGAGGGAGCAAGGTCGTGGTTCAACCACATAGACATGAGGGTATTTTTATTGCCAAGGGTAAGGAAGACGCTCTTGTCACTAAGAATCTTGTTCCTGGTGAAGCTGTTTACAATGAGAAAAGAGTCACTGTTCAGAACGAAGATGGTTCCAAAGACGAGTACAGAATTTGGAACCCTTTCCGCTCGAAGTTGGCTGCTGCCATCCTTGGTGGAGTTGATAACATATGGATCGCAAGGATTTTGGGGCTCAATGCTTCATATTATCTCAAAGCGGGAGGTCATTTTGTTATTTCAATCAAGGCTAACTGCATAGACTCAACAGTTCCTGCGGAGGCAGTGTTTGAAAGCGAAGTGAACAAGTTGAAGGCTGATCAGTTCAAGCCATTCGAGCAAGTCACCCTCGAACCATTTGAGAGGGACCATGCTTGTGTTGTTGGTGGATACAGATTGCCTAAGAAGAAAAAAGACACTGCAGCGTAG 672 0.4985 MAPPRGRGGGGGFRGGRGDRGRGRGGGGRGGDRGTPFKARGGGRGGGRGGGRGGGRGGGRGGMKGGSKVVVQPHRHEGIFIAKGKEDALVTKNLVPGEAVYNEKRVTVQNEDGSKDEYRIWNPFRSKLAAAILGGVDNIWIARILGLNASYYLKAGGHFVISIKANCIDSTVPAEAVFESEVNKLKADQFKPFEQVTLEPFERDHACVVGGYRLPKKKKDTAA 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian7g00367 223 SMART Fibrillarin_2 71 214 IPR000692 GO:0003723|GO:0006364|GO:0008168
Vian7g00367 223 PANTHER RRNA 2-O-METHYLTRANSFERASE FIBRILLARIN 9 142 - -
Vian7g00367 223 Gene3D Vaccinia Virus protein VP39 144 214 IPR029063 -
Vian7g00367 223 Pfam Fibrillarin 142 213 IPR000692 GO:0003723|GO:0006364|GO:0008168
Vian7g00367 223 Gene3D Vaccinia Virus protein VP39 122 143 IPR029063 -
Vian7g00367 223 FunFam Fibrillarin like 1 66 121 - -
Vian7g00367 223 Gene3D Phosphorylase Kinase; domain 1 66 121 - -
Vian7g00367 223 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 148 210 IPR029063 -
Vian7g00367 223 PRINTS Fibrillarin signature 117 136 IPR000692 GO:0003723|GO:0006364|GO:0008168
Vian7g00367 223 PRINTS Fibrillarin signature 89 108 IPR000692 GO:0003723|GO:0006364|GO:0008168
Vian7g00367 223 MobiDBLite consensus disorder prediction 1 67 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian7g00367 Vian-Chr7 10015516 10018348 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian7g00367 K14563 - gmx:100789137 180.259