Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian7g00365 ATGGCGATGCTTTGTAAGGTATCATCCTCACTCTTCCTTTCACTCTCCCTCAAACCTAAACTCATCTACCGCACCAATGCCTTTCTGCTTTCTCGTTCAACCGCCACCACCTCAAAGCACAAGACGCAGAACGCAAAAGCAGGGTTGGCCAAAGAAAAGCGCAGAACGCGCTCCGACAAACACTTCAACCCAGACGCTATAATTCACCATTGCAACGTTAACCACTCCGACACCGACACCAAGTTTTCGCACATTCCGGTCATGCTGGGTGAAGTCATGGACGTCTTCTCCGCCGCTTCCTTAACCTCCTTCGTCGATTGCACCCTTGGCGCTGCCGGTCACTCCACCGCTGTGATCAAGGGTCATCCTGAGATGAAGTTTTTCGTGGGGATGGATGTGGATTCTGTTGCACACGACATTGCCCAGCCACGCCTTGATGCCGTTTTAAGTGGTGATGTCAAAGCTTTTACCGTTTTGAGGAATTTTAGAGATGTGAAGTCTGTGCTTAGAGAATTCTCAGACTTACACATGGGTGTTGATGGCATCTTAATGGACTTGGGAATGTCATCTATGCAGGTAGACAATCCTGCGAGAGGATTCAGTGTGCTCAGTGATGGACCCCTTGATATGCGGATGGATCCTCAGGCAAGTCTTAAAGCAGAGGACATATTAAATTCCTGGCCAGATTCTGAAGTGGGCCGTATCCTAAGAGAATATGGAGAAGAAAGCAATTGGCGAACCCTGCAAAAGAAAATTGTCAATGCCCGATTACATGGTGGATTTCACTCTACCTCTGATTTGCTAGATCTTATCAAGCGTGTGACTCCTCCAATGAAAGGTGGAAGACAAGGTTGGATAAAGACAGCAACCCGGGTTTTTCAAGCTCTGAGAATTGCTGTTAATGATGAACTGAAGACACTTGAGGATTCCCTCTATTCTTGTTTTGATTGCCTTGCACCCAAGGGTAGACTTGCTGTCATATCTTTTCACAGTCTTGAAGACAGAATTGTGAAACAGACATTTCTTAATATAGTCAAAGGGAGCGAAGATGTGGAAGAAAGGGAGAACCTGAACAGTGATTTGAGGAAGACTAGTGATGAAATCAAAGAAAAAGAAGCATGGATAAAGCAAGTAATACATGGGTCAAATGGAACAATTCTCACAAAAAGACCAATCACACCATCAGGAGAAGAAGAAAAATTGAACCGCAGAAGCAGAAGTGCAAAGCTCAGAGTTATTCAGAAGCACTGA 1251 0.4532 MAMLCKVSSSLFLSLSLKPKLIYRTNAFLLSRSTATTSKHKTQNAKAGLAKEKRRTRSDKHFNPDAIIHHCNVNHSDTDTKFSHIPVMLGEVMDVFSAASLTSFVDCTLGAAGHSTAVIKGHPEMKFFVGMDVDSVAHDIAQPRLDAVLSGDVKAFTVLRNFRDVKSVLREFSDLHMGVDGILMDLGMSSMQVDNPARGFSVLSDGPLDMRMDPQASLKAEDILNSWPDSEVGRILREYGEESNWRTLQKKIVNARLHGGFHSTSDLLDLIKRVTPPMKGGRQGWIKTATRVFQALRIAVNDELKTLEDSLYSCFDCLAPKGRLAVISFHSLEDRIVKQTFLNIVKGSEDVEERENLNSDLRKTSDEIKEKEAWIKQVIHGSNGTILTKRPITPSGEEEKLNRRSRSAKLRVIQKH 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian7g00365 416 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 84 415 IPR029063 -
Vian7g00365 416 SUPERFAMILY Putative methyltransferase TM0872, insert domain 198 301 IPR023397 GO:0008168
Vian7g00365 416 Gene3D Vaccinia Virus protein VP39 84 413 IPR029063 -
Vian7g00365 416 Coils Coil 351 371 - -
Vian7g00365 416 Hamap Ribosomal RNA small subunit methyltransferase H [rsmH]. 84 416 IPR002903 GO:0008168
Vian7g00365 416 MobiDBLite consensus disorder prediction 386 409 - -
Vian7g00365 416 FunFam Ribosomal RNA small subunit methyltransferase H 196 303 - -
Vian7g00365 416 PANTHER S-ADENOSYL-METHYLTRANSFERASE MRAW 80 415 IPR002903 GO:0008168
Vian7g00365 416 Gene3D Putative methyltransferase TM0872, insert domain 196 303 IPR023397 GO:0008168
Vian7g00365 416 Pfam MraW methylase family 82 415 IPR002903 GO:0008168
Vian7g00365 416 NCBIfam 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH 81 415 IPR002903 GO:0008168
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian7g00365 K03438 - gmx:100787277 701.434