Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian7g00362 ATGGGGGATGAGAAAGCTGAGAAGAAAGAAAGTGGTGCGGTGAAGGAGAATATCGAGAACAATGGGGAGAAGGCGAAGGAAGAGAAGAAGACAAAGAAGAAGGGGTTTATTTCGCGAATATGGAACGCGATATTCAGGTCCAACAACGACGATTTCGAGAAGAGGCTTCAGTATATCACCAAAGAAGAAAACGCCGTCGTTGTGAGATTGAGCAACAGATCTCGCTCTTGGAGGCGAACCTCTCGCCAGCTTATTTTATTTTCCGTTCTGTTCGAGGTCATTGCTGTAGGTTATGCTATTATGACGACAAGATCAATGGATATGAATTGGAAAATGCGGGCAATTCGAGTGTTGCCAATGTTTCTTTTGCCTGCCTTGTCAACTGCTACATATTCAACATTTGTCAGCTTCACAAGGATGTGTGATCGCAAGGACCAGAAAATTCTTGAAAGGCTTAGAGCTGAAAGGAAAGCGAAAATTGATGAGCTCAAAGAGAAGACAAACTATTACATTACTCAGCAACTCATTCAGAGATATGACACGGATCCAACAGCAAAAGCAGCAGCTGCAACTGTTTTAGCATCTAAGTTGGGTTCAGATTCTGGTTTGAACGTGTATGTGGAAGATGAATCTTCTGCTGCTCCAACTGGGAAGACCAAGGATGTTGAAGTTGTGCAGTCAAGTGGTCTTCGAAATCGCAAGCAAGTGAACTCTAGATCCATTAGTCCGGGGACAAAGACAACAAATTATTCTAATGAACAATTAGTTGGTTCTGGGAAAATTAATCAAACTCAAACTCCTGAGCATAATGAGCTTGTAGTTGTTGAACATCATCCTCAAAGTTCAGCAATGAATGATGGAGGATGGATTGCTCGAATTGCAGCATTGCTTGTGGGTGAGGATCCAACCCAGTCTTATGCACTCATATGTGGTAATTGCCATATGCATAATGGCCTTTCTCGGAAGGAGGATTTCCCATTCATTACTTATTACTGCCCACACTGTCACGCCTTGAACAAACCAAAGCATTCGGATGAGCATATATCTCTACCAAACACCGATTCTCCAAAAGCAGATGATGGCAAAGAAGTCCAAAAAGCTGGTGCTTCTGACAGCTTAATCGCAAGCGATAATCCTGTAAAAGCGACCCCTGAGATTGAGGAAGTGGCTGACCGGGCTATTTCAGGTGATGAAAGCTAG 1200 0.4317 MGDEKAEKKESGAVKENIENNGEKAKEEKKTKKKGFISRIWNAIFRSNNDDFEKRLQYITKEENAVVVRLSNRSRSWRRTSRQLILFSVLFEVIAVGYAIMTTRSMDMNWKMRAIRVLPMFLLPALSTATYSTFVSFTRMCDRKDQKILERLRAERKAKIDELKEKTNYYITQQLIQRYDTDPTAKAAAATVLASKLGSDSGLNVYVEDESSAAPTGKTKDVEVVQSSGLRNRKQVNSRSISPGTKTTNYSNEQLVGSGKINQTQTPEHNELVVVEHHPQSSAMNDGGWIARIAALLVGEDPTQSYALICGNCHMHNGLSRKEDFPFITYYCPHCHALNKPKHSDEHISLPNTDSPKADDGKEVQKAGASDSLIASDNPVKATPEIEEVADRAISGDES 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian7g00362 399 Coils Coil 146 169 - -
Vian7g00362 399 PANTHER ENDOPLASMIC RETICULUM JUNCTION FORMATION PROTEIN LUNAPARK 30 378 IPR040115 GO:0071786
Vian7g00362 399 MobiDBLite consensus disorder prediction 231 252 - -
Vian7g00362 399 MobiDBLite consensus disorder prediction 1 30 - -
Vian7g00362 399 MobiDBLite consensus disorder prediction 343 399 - -
Vian7g00362 399 MobiDBLite consensus disorder prediction 343 366 - -
Vian7g00362 399 Pfam Predicted integral membrane zinc-ribbon metal-binding protein 289 339 IPR019273 -
Vian7g00362 399 MobiDBLite consensus disorder prediction 384 399 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian7g00362 Vian-Chr7 9953371 9957500 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian7g00362 K23292 - gmx:100815496 602.053