Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian7g00361 ATGGCCATGGCTCTGCACCTCTGTGTCACTTTCAATTCAACCACTTCCAGTTTTCCTCAAGGTAGAAAATGCAAGTACGAAGGCCAATCAGTGAGAGCACTTCCTATACGTATATTATCAGTGGGGAAGAAGCGATCACCTGGACTTCAACTCATGGTTGATGAGTATGTTGATAAGCTCAGGTACTATTGCAGTGTTGAGGACGTTCAAATTCGGACAAATCCTCGAAATGCACGTGACCAAAGGGCTCAGGTTGATGCTGAAGATGAGGCAGTAATGAACCTTATAAGGTCTGATGATTGGGTTGTGATGTTGGATGAACGTGGGCTAGACATAGGATCTGAGCAAATGGCAGAGTTGGTGGGTGATGCAGGAAATACTGGTGCTTCACGGATATCTTTTTGTATTGGTGGTCCCTATGGTCATGGAAGAAAAATAAAGGAACGGGCTAACTTATCAATCAAGTTATCTTCACTGGTCTTAAATCACCAAATAGCATTACTTGTACTCATGGAACAGCTTTACAGGTCTTGGACAATTTTAAAAGGACAAAAGTATCACCATTAG 567 0.425 MAMALHLCVTFNSTTSSFPQGRKCKYEGQSVRALPIRILSVGKKRSPGLQLMVDEYVDKLRYYCSVEDVQIRTNPRNARDQRAQVDAEDEAVMNLIRSDDWVVMLDERGLDIGSEQMAELVGDAGNTGASRISFCIGGPYGHGRKIKERANLSIKLSSLVLNHQIALLVLMEQLYRSWTILKGQKYHH 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian7g00361 188 SUPERFAMILY alpha/beta knot 35 186 IPR029028 -
Vian7g00361 188 Gene3D - 35 188 IPR029026 -
Vian7g00361 188 CDD RlmH-like 36 188 IPR003742 GO:0006364|GO:0008168
Vian7g00361 188 PIRSF MT_bac 34 188 IPR003742 GO:0006364|GO:0008168
Vian7g00361 188 PANTHER METHYLTRANSFERASE 8 188 IPR003742 GO:0006364|GO:0008168
Vian7g00361 188 Hamap Ribosomal RNA large subunit methyltransferase H [rlmH]. 34 188 IPR003742 GO:0006364|GO:0008168
Vian7g00361 188 SFLD SPOUT Methyltransferase 7 188 - -
Vian7g00361 188 Pfam Predicted SPOUT methyltransferase 36 187 IPR003742 GO:0006364|GO:0008168
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian7g00361 K00783 - gmx:100796609 336.265
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian7g00361 7 9941180 9946250 Vian7g00361 7 9941180 9946250 ECH