Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian7g00285 ATGTGGTGCAGGAAGAAGAAAGATATTCATGGACTCGCACAACCAAAAACGTTGAAGAAGGAATTGACCGTGGAAATGAAAGTGACTTGGAAGAACAACAAAAAGAAACGTTGTTTACCCACGCTGTCCCACTTCAGTGACCTTCCCTTCGAGCATAACGACCAACCCCATTCAGAAGATGGCGCGCGTGTTCCCGATCCTGACCAATCTCGCGCAGCACAATTGGCGCATGAATTTCAAGCTCAAGGAGATAAGCTGGCAGTGGATGGGAAGTACCAGGAAGCACTAAGTAAATGGGAGGCTGCTCTTGCGTTGGCACCTGATGTTCCAATTTTGCATGAACAAAAAGCCCAAGTTTTACTAGAAATTGGAGACACTTGGAATGCTTTAAAGGCTGCAACTCGTGCGACTTATGCCAAAAAATCTGCCGAAGCTTGGGTCACACTAGGCAGAACACAACTGAATTTTGGTGAGCCTGATAATGCTATTGAAAGCTTTGACCGAGCTTTAGCTCTCAAGCCTGATTACGAGGAAGCTAAAGAAGATAGGAAAACCTCTTTACATCTTGTAAAGAAGAGAAGGCAACTTCATTCATCTGGCTTGAGTGACACTCAAAATCGTTATGTTGTGGGTGAAAAGGATGAAAGCCACCAGTGA 657 0.449 MWCRKKKDIHGLAQPKTLKKELTVEMKVTWKNNKKKRCLPTLSHFSDLPFEHNDQPHSEDGARVPDPDQSRAAQLAHEFQAQGDKLAVDGKYQEALSKWEAALALAPDVPILHEQKAQVLLEIGDTWNALKAATRATYAKKSAEAWVTLGRTQLNFGEPDNAIESFDRALALKPDYEEAKEDRKTSLHLVKKRRQLHSSGLSDTQNRYVVGEKDESHQ 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian7g00285 218 SMART tpr_5 143 176 IPR019734 GO:0005515
Vian7g00285 218 SMART tpr_5 76 109 IPR019734 GO:0005515
Vian7g00285 218 Pfam Tetratricopeptide repeat 82 135 - -
Vian7g00285 218 ProSiteProfiles TPR repeat region circular profile. 143 175 - -
Vian7g00285 218 ProSiteProfiles TPR repeat profile. 143 176 IPR019734 GO:0005515
Vian7g00285 218 PANTHER OSMOSIS RESPONSIVE FACTOR 26 217 - -
Vian7g00285 218 Pfam Tetratricopeptide repeat 143 180 - -
Vian7g00285 218 SUPERFAMILY TPR-like 76 192 IPR011990 GO:0005515
Vian7g00285 218 Gene3D Tetratricopeptide repeat domain 66 213 IPR011990 GO:0005515
Vian7g00285 218 MobiDBLite consensus disorder prediction 194 218 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian7g00285 Vian-Chr7 8338727 8343550 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian7g00285 - - ccaj:109815748 310.071
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian7g00285 7 8338727 8343550 Vian7g00285 7 8338727 8343550 ECH