LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Vian7g00222	ATGCATCCTTTCTGCTGTGTCTCCGTCGTCTCCGACCACTCCTCTCCGGTCACCCTCGACATGCCCCCTATCCCTGCCGCACCCAGATCCGACCCCGCTCACCGAACTGGACAAGCCCTCCACTCCCTCACCAACTGCGGCGAAGGCGGCCGCGGGCACCCCTTGCCGGCTGCAGTGGACGTCAGGATCAAAGACCTCGTCGGGAACGGAATCTCCGGGATTCTGCACAAGTGGGTGAACTATGGCAAAGGATGGAGAACGCGCTGGTTCGTGCTTCAAGATGGTGTCCTCTCCTACTACAAGATTCATGGACCCGACAAGATCATCGTGAACTCTGAAACCGAGAAGGGATCGAAGGTCATTGGTGAGGAATCCGGGAGACTGATCTCTCGCAACCGCAATTCGAACCACGTCGATCGTCGCCGAAAGCCCGTAGGCGAAATCCATCTCAAGGTATCGACTATTCGTGAGAGCAGGTCCGATGACAAGCGATTCTCTGTTTTCACTGGGACTAAGAGACTCCATTTGAGGGCCGAGACTCATGATGATCGGGTGGCATGGATGGATGCCTTGCAGGCAGTGAAAGATATGTTTCCCCGGATATCAAACAGTGAGTTGATGGCTCCAGTGGACAATGTGGCTGTTTCGACAGAGAAACTCAGGCTTCGGCTTATGGAGGATGGAGTGAGCGAGGAAGCCATTCGAGACAGTGAACAGATAATGAGAAATGAGTATGCTGCGCTCCAAAACCAGCTTCTGCTGCTTAAACAAAAACAGGTGGCTCTAATCGACACTTTGCGGCAATTAGAGACAGAAAAGGTTGATCTGGAGAATACTGTGGTTGACGAAAGCCAAAGACAGTTGAATGATCAAGAGGTTTCCTCTAGATTAGGGCAGGAAAAATCTAGTGAAGAAAGTGGAACTGAGTCTGAGGATGATAATGAGAGAAATGATGCAGCTGAGGAAGAAACAGATGATGAAGACACTGCCTTTTTTGACACTCGGGATTTTCTGTCATCTTCGAATTCTTTTAAAAACGATGAAGGACTCTATGCTGTTGAATCAGAGGAGGATGTAGATCCTTCCATTAGATCTGTTGGATTCAACTATCCTTACGTTAAGCGGCGAAAGAAATTACCTGATCCTGTTGAAAAGGAGAAAGGTGTCAGTCTTTGGTCAATGATTAAGGACAATATTGGGAAGGATCTAACAAAAGTTTGCCTTCCTGTTTATTTTAATGAGCCTCTCTCTTCTTTGCAAAAGTGCTGTGAAGAAATGGAATACTCATATCTTCTAGACCGAGCATATGAATGGGGAAGAAGGGGTAATAGCCTCATGAGAATTCTCAATGTTGCTGCTTTTGCTGTATCTGCCTATGCTTCGACTGAAGGAAGAATCTGTAAACCATTTAACCCATTACTAGGGGAAACATATGAGGCTGACTTTCCGGATAAAGGCTTTCGATTTTTCTCGGAGAAGGTCAGTCATCACCCAATGATAGTTGCATGTCACTGTGAGGGTACAGGTTGGAAATTTTGTGGAGATAGCAACTTAAAGAGCAAATTTTGGGGTCGGTCAATTCAGCTTGATCCTGTTGGCTTTTTGACTTTGGAATTTGATGATGGTGAAGTATTCCAGTGGAGTAAGGACAGAAATGGGAAAATATTGTCTACTTTGCTCGGAAAATGGGATGACAGCATGTATTATATAAATGGAGACTATAGTGGGAAGGGAAAAGGTTATGAATCAATGTCAGATGCCCATTTACTATGGAAGCGGAGCAAGCCGCCCAAGTTCCCCACTAGATACAACTTCACTCGGTTTGCCATCACATTAAATGAACTTACCCCTGGATTAAAGGATAAGCTGCCACCAACTGATTCCAGGTTAAGACCTGATCAAAGGCATTTGGAAAATGGAGAGTATGAGATGGCAAATTCAGAAAAATTGCGACTTGAACAGCGTCAACGTCAGGCTCGGAAAATGCAAGAGAGCGGTTGGGAACCACGGTGGTTTGGTAAGGATAAAGAGAGCGGTTCCTACCGCTACTTGGGAGGGTATTGGGAGGCTCGAGAACAAGGAAATTGGAACTCATGTCCTGACATTTTTGGTCAAATTCCTTCTGATCATCTCTTGGACGAAGGTCAATGA	2151	0.4635	MHPFCCVSVVSDHSSPVTLDMPPIPAAPRSDPAHRTGQALHSLTNCGEGGRGHPLPAAVDVRIKDLVGNGISGILHKWVNYGKGWRTRWFVLQDGVLSYYKIHGPDKIIVNSETEKGSKVIGEESGRLISRNRNSNHVDRRRKPVGEIHLKVSTIRESRSDDKRFSVFTGTKRLHLRAETHDDRVAWMDALQAVKDMFPRISNSELMAPVDNVAVSTEKLRLRLMEDGVSEEAIRDSEQIMRNEYAALQNQLLLLKQKQVALIDTLRQLETEKVDLENTVVDESQRQLNDQEVSSRLGQEKSSEESGTESEDDNERNDAAEEETDDEDTAFFDTRDFLSSSNSFKNDEGLYAVESEEDVDPSIRSVGFNYPYVKRRKKLPDPVEKEKGVSLWSMIKDNIGKDLTKVCLPVYFNEPLSSLQKCCEEMEYSYLLDRAYEWGRRGNSLMRILNVAAFAVSAYASTEGRICKPFNPLLGETYEADFPDKGFRFFSEKVSHHPMIVACHCEGTGWKFCGDSNLKSKFWGRSIQLDPVGFLTLEFDDGEVFQWSKDRNGKILSTLLGKWDDSMYYINGDYSGKGKGYESMSDAHLLWKRSKPPKFPTRYNFTRFAITLNELTPGLKDKLPPTDSRLRPDQRHLENGEYEMANSEKLRLEQRQRQARKMQESGWEPRWFGKDKESGSYRYLGGYWEAREQGNWNSCPDIFGQIPSDHLLDEGQ	716

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Vian7g00222	716	Gene3D	-	69	198	IPR011993	-
	Vian7g00222	716	ProSiteProfiles	PH domain profile.	68	196	IPR001849	-
	Vian7g00222	716	MobiDBLite	consensus disorder prediction	282	296	-	-
	Vian7g00222	716	Pfam	Pleckstrin homology domain	76	192	-	-
	Vian7g00222	716	PANTHER	OXYSTEROL-BINDING PROTEIN-RELATED	70	549	IPR000648	GO:0008289
	Vian7g00222	716	MobiDBLite	consensus disorder prediction	25	48	-	-
	Vian7g00222	716	SUPERFAMILY	Oxysterol-binding protein-like	385	708	IPR037239	-
	Vian7g00222	716	Gene3D	-	634	696	-	-
	Vian7g00222	716	Gene3D	-	476	551	-	-
	Vian7g00222	716	FunFam	Oxysterol-binding protein-related protein 2A	634	705	-	-
	Vian7g00222	716	Coils	Coil	642	662	-	-
	Vian7g00222	716	SMART	PH_update	69	198	IPR001849	-
	Vian7g00222	716	CDD	PH_ORP_plant	71	203	-	-
	Vian7g00222	716	MobiDBLite	consensus disorder prediction	306	330	-	-
	Vian7g00222	716	MobiDBLite	consensus disorder prediction	282	332	-	-
	Vian7g00222	716	Coils	Coil	238	286	-	-
	Vian7g00222	716	Pfam	Oxysterol-binding protein	549	692	IPR000648	GO:0008289
	Vian7g00222	716	Pfam	Oxysterol-binding protein	390	549	IPR000648	GO:0008289
	Vian7g00222	716	SUPERFAMILY	PH domain-like	71	200	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Vian7g00222	Vian-Chr7	6816057	6822779	Dispersed/Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Vian7g00222	K20456		-	gmx:100812036	1203.73

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Vian7g00222	7	6816057	6822779	Vian7g00222	7	6816057	6822779	ECH