Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian7g00217 ATGTGTGGAAGTGAGACACTGTGGCCGGCGGTGACGCCGGGAGAAAAATTCAACGGCGGCGGTTTCGTCCTCAAACCGGGCCAATCCGCGGTATTCACCGCCCCGGTCAGTTGGAGCGGGCGCATTTGGGCTCGAACCGGTTGCAGATTCGACCAGAACGGAAACGGCCAGTGCCAAACCGGTTCATGCGGCACCACGCTGAAATGTTCGGCCTCGGGAAAAACTCCCGCTTCACTCGCGGAATTCACACTCGCGCAACCCGACTTCTACGACGTTAGCCTCGTGGACGGCTTCAACGTCCCCATCTCCATTAGGCCCATTAACGGAAAGGGAAACTGCTCTTCCGCGGGGTGCGACTCCGACCTCAGAACTACTTGCCCTAACGAACTGTCCGTTAAGGCTAACGGGAAGACGGTTGGGTGCCGTAGCGCGTGTGACGTGTTTAACACGGACGAGTATTGCTGCAGAGGGAATTTTGGGAACCCCTCCACTTGCAAACCCACCTTTTATTCGAAGAAGTTTAAGGAAGCTTGTCCCACTTCTTACAGTTATGCCTACGATGATCCAACCAGCATCTTCACTTGTTCAGGAACTGATTATGTCATAGCCTTCTGCTCCTCCAGCGGCGACGATCGGTGTCGCCGGCGACTTCTTGGGCGAAGCAGAAGGACCGTCGTGGCAGCCGGCTCAGTTGGGAGAGCAAAGGCTTTAGGGTTCGCGACTGGGAGAGGTCGGTCCGCCGTTAAGGGCGCAAGTTCTTCTATTAGAGGCACCGACGGCGGCTGGCCTCGTTGGTGGCCGGGAGAACGCGTCCCATTGAGTGAGTGTGTTTCTCTTTCGCGCACGAAGAGAAGATGTAAAAGGAGGGCTTTCGTAGTCGTCGGCGTCATTGTGTGTCGACGAGCAATGTTGTCGCCTTTGGCTGATCGGAAGGGGTGCTGGCCCGGTGGGTGCTGTTGTTCTCACGGAGAAAGAAGAGGGGATGACCCCGATTTTGCCCAGGGAAGAAGAAAGGAAACTAACGTCATTCTGGGATTGAAGCTGCAGCGCACCAGATCGAAGAAAGAGACGCTGACGGATTTAGGGTTCGTTGTTGTTGAAGATTGGAAAGTAATTGAAGTGTCTTTTCGGGAAGCTTGGTCTGGGATTTTAGGGTCTATTGATAGTGCTACTGCAGGATATAAAAATCCCTGGACTGGCGTTTCAGGTGGCTTGCCATCATTGGATTCTGCCCCTTCAAGTCCAGGGCATTCTTCAATTATTCCTCGAACTGCAGGTGCATGGTTAGAACAAGTTTCAGGTCTAGGGTGCACTGTTGAGGGGATGTGGAATCAGATTCCACACCTATCGAGATTGAGTGGTCGCAAACCTGAAGTTGTTGTTGTTCACCTTGCACATCAACCTCCAGATAGCAACCCTTACTCCAATCACGAAGCTCCAATGCCCTAA 1449 0.5355 MCGSETLWPAVTPGEKFNGGGFVLKPGQSAVFTAPVSWSGRIWARTGCRFDQNGNGQCQTGSCGTTLKCSASGKTPASLAEFTLAQPDFYDVSLVDGFNVPISIRPINGKGNCSSAGCDSDLRTTCPNELSVKANGKTVGCRSACDVFNTDEYCCRGNFGNPSTCKPTFYSKKFKEACPTSYSYAYDDPTSIFTCSGTDYVIAFCSSSGDDRCRRRLLGRSRRTVVAAGSVGRAKALGFATGRGRSAVKGASSSIRGTDGGWPRWWPGERVPLSECVSLSRTKRRCKRRAFVVVGVIVCRRAMLSPLADRKGCWPGGCCCSHGERRGDDPDFAQGRRKETNVILGLKLQRTRSKKETLTDLGFVVVEDWKVIEVSFREAWSGILGSIDSATAGYKNPWTGVSGGLPSLDSAPSSPGHSSIIPRTAGAWLEQVSGLGCTVEGMWNQIPHLSRLSGRKPEVVVVHLAHQPPDSNPYSNHEAPMP 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian7g00217 482 ProSiteProfiles Thaumatin family profile. 6 205 IPR001938 -
Vian7g00217 482 PRINTS Pathogenesis-related protein signature 196 205 IPR001938 -
Vian7g00217 482 PRINTS Pathogenesis-related protein signature 54 83 IPR001938 -
Vian7g00217 482 PRINTS Pathogenesis-related protein signature 41 52 IPR001938 -
Vian7g00217 482 PRINTS Pathogenesis-related protein signature 20 29 IPR001938 -
Vian7g00217 482 PRINTS Pathogenesis-related protein signature 88 104 IPR001938 -
Vian7g00217 482 CDD TLP-PA 4 205 - -
Vian7g00217 482 Gene3D Thaumatin 2 205 IPR037176 -
Vian7g00217 482 SMART tha2 6 206 IPR001938 -
Vian7g00217 482 FunFam Thaumatin-like protein 1a 1 206 - -
Vian7g00217 482 Pfam Thaumatin family 4 205 IPR001938 -
Vian7g00217 482 PANTHER OS03G0233200 PROTEIN 4 205 IPR001938 -
Vian7g00217 482 SUPERFAMILY Osmotin, thaumatin-like protein 4 206 IPR037176 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian7g00217 Vian-Chr7 6695900 6703818 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian7g00217 6 205 Receptor kinase-like Gene Family AT5G38280 42.991 3.79e-48 174
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian7g00217 - - gmx:100813659 409.838
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian7g00217 7 6695900 6703818 Vian7g00217 7 6695900 6703818 ECH