Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian7g00204 ATGTCAATGGCTACTCCACACTTTCAGAGTAGCATTCAGCCTTTCGCACTCTTCCATTTAATACTCCTCTTCTCCTCGCTCCTCCACACGGCAACCGCAACCCCAAGTCACCAACAAGAACAAGAAGAAGACACTCCCATCACGCGCTTCCAGCACTACCTCCGCATCAACACGGCCCACCCCGCCCCTGACTACTACTCCGCAGTCTCCTTCCTCAAAGCCCAAGCCCATTCCTTGGGCCTTACCTCCAAGACCTTCGAGTTCACCCCCGGCAAGCCCCTCCTCCTCCTCACCTGGCCCGGCTCAAACCCCTCCCTCCCCTCGATCCTCCTCAACTCCCACCTCGACTCCGTCCCCGCCGAGCCCTCCAAGTGGCTCCACCCACCATTCTCCGCCCACCGCACATCCGACGGCAAAATTTTCGCCCGCGGCGCCCAGGACGACAAATGCATCGCCGTCCAGTACCTTGAGGCCATCCGCAACCTCAAGGCCCACGCCTTCTCTCCCCTCCGCTCCGTCCACATCTCCCTCGTCCCCGACGAGGAGATAGGCGGCTTAAACGGCGCCGCCAAGTTCGTCGAGTCCGATGACTTCCTCCGCCTCAACGTTGGTTTCGCGCTCGACGAGGGGCAGGCCTCGCCTGGCGACGAATTTAGGGTTTTCTACGCGGACAGGGTTCCGTGGAACGTGATAATCCGGGCCAAGGGAATGCCCGGGCACGGGGCGAGGATGTACGATGGGAGTGCGATGGAGAATCTGATGGAGAGTATGGAGGCTGTGAGTAGGTTCCGGGAGAGCCAGTTTGACGTGGTTAAGGCTGGGAAAGCGTTGAACGGCGAGGTTGTGTCGGTGAATCCAGTTTATGTTAAGGCTGGTGTTACTTCTGATGACGAGTTTGCGATGAATGTGCAACCTTCGGAGGCGGAGGCTGGTTTTGATCTAAGGCTGACGCCTACGACTGACCCGGACGAGATGAGGAGGAGAATTGCAAAGGAATGGGCGCCGGCTGTTAGAAATATGTCGTATGAGATTACTGAGAAAGGACCCATCAGAGACTACATGGGACGCCCGATAATGACTGCAACTAATGATTCCAATCCATGGTGGTCAGTTTTCAAGCAAGCTATCACATCTATTGGAGAAAAACTCTCAAGTCCTGAAATTCTTGCATCCACAACTGATGCAAGATACCTCAGACAGAAAGGAATTCCTGTACTCGGTTTCTCCCCAATGAAAAATACTCCCATCTTGCTTCATGATCACAACGAGCACTTAAAAGATACCGTGTTCATGAAGGGAATACAAGTGTACGAGTCTCTTATAAGTTCCTTAAGTACATTTACCGAAGCTTCACATTAG 1359 0.5423 MSMATPHFQSSIQPFALFHLILLFSSLLHTATATPSHQQEQEEDTPITRFQHYLRINTAHPAPDYYSAVSFLKAQAHSLGLTSKTFEFTPGKPLLLLTWPGSNPSLPSILLNSHLDSVPAEPSKWLHPPFSAHRTSDGKIFARGAQDDKCIAVQYLEAIRNLKAHAFSPLRSVHISLVPDEEIGGLNGAAKFVESDDFLRLNVGFALDEGQASPGDEFRVFYADRVPWNVIIRAKGMPGHGARMYDGSAMENLMESMEAVSRFRESQFDVVKAGKALNGEVVSVNPVYVKAGVTSDDEFAMNVQPSEAEAGFDLRLTPTTDPDEMRRRIAKEWAPAVRNMSYEITEKGPIRDYMGRPIMTATNDSNPWWSVFKQAITSIGEKLSSPEILASTTDARYLRQKGIPVLGFSPMKNTPILLHDHNEHLKDTVFMKGIQVYESLISSLSTFTEASH 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian7g00204 452 Gene3D - 230 338 - -
Vian7g00204 452 FunFam Aminoacylase 1 38 229 - -
Vian7g00204 452 FunFam Aminoacylase-1, putative 366 447 - -
Vian7g00204 452 Pfam Peptidase family M20/M25/M40 110 442 IPR002933 GO:0016787
Vian7g00204 452 SUPERFAMILY Bacterial exopeptidase dimerisation domain 229 344 IPR036264 -
Vian7g00204 452 FunFam aminoacylase-1 isoform X1 229 340 - -
Vian7g00204 452 ProSitePatterns ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 145 184 IPR001261 -
Vian7g00204 452 NCBIfam N-acyl-aliphatic-L-amino acid amidohydrolase 39 446 IPR010159 GO:0004046|GO:0005737|GO:0006520
Vian7g00204 452 CDD M20_AcylaseI_like 43 445 - -
Vian7g00204 452 Gene3D Zn peptidases 36 229 - -
Vian7g00204 452 Pfam Peptidase dimerisation domain 228 331 IPR011650 -
Vian7g00204 452 Gene3D - 366 446 - -
Vian7g00204 452 PANTHER AMINOACYLASE-1 29 449 - -
Vian7g00204 452 PIRSF ACY-1 36 449 - -
Vian7g00204 452 SUPERFAMILY Zn-dependent exopeptidases 44 445 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian7g00204 Vian-Chr7 6408845 6416401 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian7g00204 K14677 - gmx:100817383 730.709
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian7g00204 7 6408845 6416401 Vian7g00204 7 6408845 6416401 ECH