Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian7g00203 ATGGCTCGGAGCATAACGGACCTTGCAACTGGAGCGTCCCTGGTCGCTTTGTTCTTATGCTTAACCACACACTTTTCGGTGCTCCCACTTGCAGAGGCAGTGTGGTTTACAATCCCCACTACGGGGACTAAGTGCATGTCCGAGGAAATCCAGAAAAACATTGTTGTTTTAGCCGATTACTATGTTGTCACTGAAGGTGATCCCCAGCTCAGCACAGTTTCTGTCAAGGTAACATCTCCTTATGGGAATAGCCTTTACGATAATCAAAATGCTACACAAGGTCAATTTGCATTTACAACAGAGGAGAGTGGGAACTACGTGGCGTGCTTTTGGATGGATGGTAAACATGAACAAGAAGGAACTTTGAGCCTTGAATGGAAAACTGGAATTGCTGCCAAAGATTGGGAGTCCGTTGCAAAGAAAGAGAAGATCGAGGGTGTTGAACTCGAGCTCAGGAAACTTGAAGGAGCAGTAGAAGCCATCCATGGTTATCTAATTTATATGAAGGATAAGGAAGCAAGGATGAGAGAAGTCAGTGAAAAAACAAATAGCAGAGTTGCTTGGTATAGCCTCATGTCTCTTGGTATCTGCGTTTTGGTTTCTTTATTACAAGTGTGGCATCTAAAGCGGTTTTTTCTGAAGAAGAAACTCATATAG 657 0.4353 MARSITDLATGASLVALFLCLTTHFSVLPLAEAVWFTIPTTGTKCMSEEIQKNIVVLADYYVVTEGDPQLSTVSVKVTSPYGNSLYDNQNATQGQFAFTTEESGNYVACFWMDGKHEQEGTLSLEWKTGIAAKDWESVAKKEKIEGVELELRKLEGAVEAIHGYLIYMKDKEARMREVSEKTNSRVAWYSLMSLGICVLVSLLQVWHLKRFFLKKKLI 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian7g00203 218 PANTHER TRANSMEMBRANE EMP24 DOMAIN-CONTAINING PROTEIN 14 214 IPR015720 -
Vian7g00203 218 SMART EMP24_GP25L_2 33 213 IPR009038 -
Vian7g00203 218 Pfam emp24/gp25L/p24 family/GOLD 33 212 IPR009038 -
Vian7g00203 218 ProSiteProfiles GOLD domain profile. 43 153 IPR009038 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian7g00203 Vian-Chr7 6397962 6400565 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian7g00203 K20352 - gmx:100799948 343.199
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian7g00203 7 6397962 6400565 Vian7g00203 7 6397962 6400565 ECH