Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian7g00184 ATGCTTCTGTCTGTCATCCCAAGTTTAATTAAAGAATTATCGGCTGATGAGGTTGATGCTAGGATAAAAGCTGTGAATTTGGTGGGTAAGCTTTTTGCGGTTCAACATCGTGTTGCTCAGAAGTATCCCGAACTTTTTGTGGAGTTTTTGAAAAGATTTTCGGATAAATCTGTGGATGTTAGGATTAGTGCTCTACAATGTGCTAAAGTTTTTTATTTAGCAAATCCCTATGATGGCACAGAATCACGTGAAATTATGACTTCTATTGAAGATAGATTATTAGACTCTGATGAACAAGTGAGAAAGCAGGCAGTGTTTGTTGCCTGTGATATTTTTAGTTCAAACCTGAAACTTGTTTCATCCAAATTACTATCTCAAGTTTCTGAAAGACTCCGGGATATAAAGATAACTGTTAGAAAGAGTGCCTTGCAAAAGTTGATAAGGGTATATCAAGATTACTGCAAGAAATGTTATGAAGGTAGCATGAAAATTAGTAATCACTTTGAAGAGATTCCCTGTAAAATTATGTTGCTGTGCTATGATAAAGATTGTAAGGAGTTCAGGTTCCAGAACATGGAATTTGTTCTTGCCGATGATCTATTCCCAGAAGAGCTTCCTATTGAAGAAAGGACAAACCATTGGATACACATGTTTTCTGTTTTCAGTTTTCCTCATGAAAAGGCACTGGATACTATTTTGGCTCAAAAGAGAAGGTTCCAAAATGAAATGAAAAACTATTTGGCTATGAAGAAGAAAATGAAGGAAATTTGTCCTGAAGAAATGCAGAAGAAGATTGATAGCATGTTTACAAAAATGGCAGCATTCTTCCCGGATTCTCACAAAGCTGAAGAGTGTCTGCATAAGTTAAACCAAATTAAAGATAATAGTGTGTTTAAGTTACTTGAAAAATTGTTGGAGGAACAAGCCTTCCCTATGATTGAACAAACTATGAAAGATAAACATCTGGCAATGATTGGAGGCAGCAATCCAACTTATGAGTTTTTACGTCCACTATTCTCAAAATGTTCATCCAACATTTTCAGCTCAGAGCATGTCAGATGCATCTTAGATTATCTTACCAATAATGAAAATAGGACTTTAGAGGATTCTTCTGCAAATTTTCTGCTGGCTATTGTTCGATATTTCCCTTCTATGCTGAAAGGCTCGGAAAAGCAGTTCTTATTGTTGTTGGAACATAAAAGTTCTGTTAAGGACAAGCTGATTGAAGTTATGGCAAAGGCAGGCTGTCATATGTCTTTCAATCATAGTGATATTTATCCATTTTTAAGGAGAATTTGCTTGGATGGAACACGTAGACAGGCTAAATTTGCGGGGTCAGCAATTGTTGCTTTAAGTTCTGATCAGTCACTTTTTAGAAAGTTGTATCAGGAGCTAATTGATTCCTTATATAGGGAGCGGAATGTCCCTACTATTTTGCAATCTCTGGGATGCATTACACAATATGTTTCCAATTTTGAAACTCAAGTTGAAGAGATCACGTCATATATATTCCAGAAGATCATTCAAATGGAGCATTTGGATGATGGTCATTATGCGACATCCTTTTATGATACTGCTCAATGTAGCGAATTTTGTCAGTTAAAGATTTATTGGCTGAAAACTCTGGTGAAGATTTCTTTGCATTATGAAGGAAGTCATGTTGAGCTTAATATTAATGGATTGTTGGAGATTTTGTCAAAAATGCTACGAGAAAGTGGTTATTTTGTAAATACAACTGCTAGCTCCTGTGAGAATGATAAGGCTCATATTAGATTAGCTGCCGCAAAAGCAATCCTTCGTCTTGCTAGGAAGTGGGATTTACATATTACTCCTCAGACTTTTCAGTGTTGTATATCGATTGCAAAGGATGACTCTTTGTTTGTTAGGAGCACATTTCTTCGTAAGATCCAAAAGTTGCTGAAGGAGCATAAACTACCAATGAGATTTGCATGTGCTTTTGCTTTGGCAGCAACAAATGGCACCGGCGATCAGCAATATCAGAACTACAAGTATATGGCAGAGTTTATAAAGGATTACAGTATATTAGCCCGTAAACGAGAAAGTTCTTCTGTTCAAGGAGTCATCATTGATTACCCAGCATATGTTTTGGTCTTCTTGATTCATGTGCTTTCTCGGAATAATGACTTTCCATTTGAAGTCTGTCCAGACGAAAAAATTTATGCTGACGTTTGCAGTCCACTTTTCTTTATCCTGCAGGCATTAGTTGATATCAATATTGTTGATGGTGACCTGGACATTGTTGATGATGCTATCCTACATATAGTTAGTATTTTTCGAGCAATCAGAAAGGTTGAGGATGCTATTGATGCACAGATGACAACTAAGCTGCATATGCTGGCTGAAATTGGGATATTTACATTAAATGAATTAAGTCATGGTGGAATATCCAAATTGCAAACACCTGGACAAATTTTATTGCCTTCATCATTATATAGAGTGAGTCTCGTTAAGAATGATACTAGTTCAAAATGTCTGAAGTCATGTTTTGAGGAAAATTTTCTATGTAGAGTTTTTCAAGCACTTAAGGAATTTACTGTGGCTCATGGACATGCTGAAAAGACTGCAAAAAAATTTCCTAAGCATGGTCATAAGGTTCAACAAGATGTTAAAAAGTCTAATATTAATATTGGTGGTGTACTGGACTTGGCATCTACCGAACCAAATGATTTGTCAAGGAGAGCAATAACAAATGCTAAAAATGCGAAGCCAGACATCCGTTCGGTGAAAAGAAGAAAATGTGTGTCTGGATCTGTTGGTTTGCATGAATGCTCTACAATCGAGAAGCAACAAAAAATACCATCAAAACATTTTGGGAAGGCAATAGAGAGCAATGTGCTTTTGTCAAGTGATTCTGTGTGCTCTAAGGATTCTCTGTATGTATCACATGTGCAAACCCGGAAATCAAAAAGAGCTGCTGCTTGCTCATTGGAGAATGCTGTGACAAATAGCAAACATATTGTTGAACCTTTCAAATGTCCTAGAACCAAACGGAAAGATACATGTGGCTCAAAGGTTGCTTTAATTTTGTTGAATCATGAACCTGGTGAATATTCTTCTCTTGATGGTGGTAAAAAGGCTGCAGTTAAAAGACGCCAAGCTGCCAGAGAGGAAACACCACTGAATAAGGAAAATACAAACGTAAATGCAAATGGAAAATGCATGGAAACATCAGCTTCAGAAGTTGTCAGAACAAATGCAAATGCTAACAAGACGGAAAGTATAAATACGGTGCTGTATTCTCACGGACACGGAGCTTTGAAGACCGCGTATTCTAATCCAGAGTTGTGCACAAACTACAACACATCTCACTCCGCCGTTATTTTTCGCATTAACACAAGAACTCGGGCTTCTGTTTATACGTTTTCTTATCCTATAGGCATGCTAAAACTTTGTACTCCCAAACAAATGCCCTTTCTTTGCGCCGACAATGACCTCCTCTATCAGGGCCTCAGCAACGTCGAAGGGGGTGAAGCCCGAGGCGCACTCCACTCCAGAAACGATGTGGCAGCGCAGCAGACATCATCATCAATATATGCCTGTGTTGTCTCAAACAGCAGATCTGGAGTCATTTTCAACATTTTCCTCGCTCCCAATCTCTTCGTTAGCAATGCCAATGGAATATATCTCCCCTTACACCGCGACCCCAATGAAAGAAGATCCAATCCAATCTTCACCAAAAACTCCTTTATCCAATCCAATCCTCACATAGGGAAGACTGAATGTCGAGAAACAGGTCAAAATGAGATGCACCTAATTCACTGTTTGACTCAGAGGATCCTCCAAGTTATTCCAAATAATCCTAAGCAATTGCACCCCATTTCCTTCGGAATTGGCTCATACTCCTCGGACATATCAGTTAAACCCACCAACAACGACACCTTAATCTGCTGCAAACAAATCTGCATCACCGTAGCGCATGAAATTGAAGTGACTATCAAGAGGATTCTCACAAAATCTACACAGGGTAGGCTCATTCTCACAAACGCAGAAGATACAGAGTATGGGATTGAAAGAAGAGGCGACAGAGTTTATGTGAGGCCCGATTCAAATGAAACCCGAAACCCTCCTAGAATCGCCCCACCGGCCGCGGCGGCCTTTGGATCTTTTATGTTGGGGCTTTTCCTTGGATCTTTGGTGTTGTCTTGGTTGCAGGCAGCGTGTAGAGATTGGAGAGGTTGGGGTTTTAGGGTTCTTCATGATTCTGGGTTGGTGATGAAGGCGCGATGTGATGGTGAAGAAGATGATTTCGCTGTTGCGATTTGGGTTGCAGGTGAACTGCGCGAGGAGGTGATGGTTGCGCGAGGTGATGGCGGCACTATGCTAGGGTTTGGTGGCGGCGAGACTGTGGTGATGACAGCGCTCGTGTTTCATGGTGGAGTGATGAGGTTGCTCGCGATAGGCAGTGGCGTGATTCATTGTGTGGGTGGTGGCGCATGA 4458 0.3966 MLLSVIPSLIKELSADEVDARIKAVNLVGKLFAVQHRVAQKYPELFVEFLKRFSDKSVDVRISALQCAKVFYLANPYDGTESREIMTSIEDRLLDSDEQVRKQAVFVACDIFSSNLKLVSSKLLSQVSERLRDIKITVRKSALQKLIRVYQDYCKKCYEGSMKISNHFEEIPCKIMLLCYDKDCKEFRFQNMEFVLADDLFPEELPIEERTNHWIHMFSVFSFPHEKALDTILAQKRRFQNEMKNYLAMKKKMKEICPEEMQKKIDSMFTKMAAFFPDSHKAEECLHKLNQIKDNSVFKLLEKLLEEQAFPMIEQTMKDKHLAMIGGSNPTYEFLRPLFSKCSSNIFSSEHVRCILDYLTNNENRTLEDSSANFLLAIVRYFPSMLKGSEKQFLLLLEHKSSVKDKLIEVMAKAGCHMSFNHSDIYPFLRRICLDGTRRQAKFAGSAIVALSSDQSLFRKLYQELIDSLYRERNVPTILQSLGCITQYVSNFETQVEEITSYIFQKIIQMEHLDDGHYATSFYDTAQCSEFCQLKIYWLKTLVKISLHYEGSHVELNINGLLEILSKMLRESGYFVNTTASSCENDKAHIRLAAAKAILRLARKWDLHITPQTFQCCISIAKDDSLFVRSTFLRKIQKLLKEHKLPMRFACAFALAATNGTGDQQYQNYKYMAEFIKDYSILARKRESSSVQGVIIDYPAYVLVFLIHVLSRNNDFPFEVCPDEKIYADVCSPLFFILQALVDINIVDGDLDIVDDAILHIVSIFRAIRKVEDAIDAQMTTKLHMLAEIGIFTLNELSHGGISKLQTPGQILLPSSLYRVSLVKNDTSSKCLKSCFEENFLCRVFQALKEFTVAHGHAEKTAKKFPKHGHKVQQDVKKSNINIGGVLDLASTEPNDLSRRAITNAKNAKPDIRSVKRRKCVSGSVGLHECSTIEKQQKIPSKHFGKAIESNVLLSSDSVCSKDSLYVSHVQTRKSKRAAACSLENAVTNSKHIVEPFKCPRTKRKDTCGSKVALILLNHEPGEYSSLDGGKKAAVKRRQAAREETPLNKENTNVNANGKCMETSASEVVRTNANANKTESINTVLYSHGHGALKTAYSNPELCTNYNTSHSAVIFRINTRTRASVYTFSYPIGMLKLCTPKQMPFLCADNDLLYQGLSNVEGGEARGALHSRNDVAAQQTSSSIYACVVSNSRSGVIFNIFLAPNLFVSNANGIYLPLHRDPNERRSNPIFTKNSFIQSNPHIGKTECRETGQNEMHLIHCLTQRILQVIPNNPKQLHPISFGIGSYSSDISVKPTNNDTLICCKQICITVAHEIEVTIKRILTKSTQGRLILTNAEDTEYGIERRGDRVYVRPDSNETRNPPRIAPPAAAAFGSFMLGLFLGSLVLSWLQAACRDWRGWGFRVLHDSGLVMKARCDGEEDDFAVAIWVAGELREEVMVARGDGGTMLGFGGGETVVMTALVFHGGVMRLLAIGSGVIHCVGGGA 1485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian7g00184 1485 SUPERFAMILY ARM repeat 4 660 IPR016024 -
Vian7g00184 1485 Pfam Sister chromatid cohesion protein PDS5 protein 1 819 - -
Vian7g00184 1485 Gene3D - 259 692 IPR011989 -
Vian7g00184 1485 Gene3D - 2 159 IPR011989 -
Vian7g00184 1485 Coils Coil 236 256 - -
Vian7g00184 1485 PANTHER ANDROGEN INDUCED INHIBITOR OF PROLIFERATION AS3 / PDS5-RELATED 1 985 IPR039776 GO:0007064
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian7g00184 Vian-Chr7 6020676 6068274 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian7g00184 K11267 - gmx:100777822 1679.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian7g00184 7 6020676 6068274 Vian7g00184 7 6020676 6068274 ECH