Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian7g00178 ATGCATATCAGTAGATGCAAACAGAGCACAATGGAGTTTTCCCTTAACAAGCTATTTCTCAACCCTCTTGTCTCTGCACTTGCACTTTTGTTCATTGCTACAACTTCACTCAACCCTGCATCGGCCTCAAAACGCTGTGATTTCCCGGCCATCTTTAACTTTGGTGCCTCAAACGCTGACACTGGTGGCTTGGCTGCTTCCTTCCCTTTTGCTGCACCAAAACCACCCAGTGGAGACACCTTTTTTCGCAGACCTGCTGGAAGATTCTGTGATGGACGACTCATCATTGATTTCATGGCACAGAGATTTGGACTCCCTTATCTCAGTCCATATCTTGATTCAATGGGGTCCAACTTCTCACGTGGAGCGAATTTTGCAACAGCAGGATCAACAATCAGACTCCAACAAGCCGCAGTGCAGTATAGAACCAGTCCTTTCAGCCTTGGAATTCAATACCAGCAATTCGAACGTTTTAAACCTACTACGAAGTTCATTAGGGACCAAGGTGGGGTGTTTGCAGCACTGATGCCCAAAGAAGAATACTTTGATGAAGCTTTGTACACATTTGATATAGGTCAAAATGATATTACAGTTGGCTTTTTTGGTAACACGACTCTTCAACAAGTTAATGCGTCTATACCTGATATAATATCGAACTTCACATCAAATATAAAGAACATATACAATTTGGGGGCTAGATCTTTTTGGATTCACAACACTGGACCTGTTGGTTGTCTTCCTTTGATTTTGACCAATTTTGAATCTGCTGAAAGGGATAAGTATGGTTGTGCAAAGTCATACAATGAAGTGGCTCGTTCTTTTAACCAAAATTTGAAGGAAGCCTTGGCTCATCTTCGTAAGGACCTTCCTACTGCTGCAATTACATATGTAGATATCTACTCTGCTAAGTACTCTCTTTTCAGAGACCCAAAGAAATATGGATTTGAGCTTCCACTTGTTGCTTGTTGTGGCTATGGAGGGAAGTACAACTTCAGTAATAGTGTTGGATGTGGAGGAACCATTAAGGTCAATGACAATGATATTTTTGTGGGTTCTTGTGAAAGACCATCTGTTAGAGTGATATGGGATGGGGTCCACTACACTGAAGCAGCTAACAAAGTTGTCTTCGATCAAATCTCTTCTGGGGCTTTCACAGATCCACCCATTCGATTGAATATGGCATGCCACAGAAAATAG 1197 0.4202 MHISRCKQSTMEFSLNKLFLNPLVSALALLFIATTSLNPASASKRCDFPAIFNFGASNADTGGLAASFPFAAPKPPSGDTFFRRPAGRFCDGRLIIDFMAQRFGLPYLSPYLDSMGSNFSRGANFATAGSTIRLQQAAVQYRTSPFSLGIQYQQFERFKPTTKFIRDQGGVFAALMPKEEYFDEALYTFDIGQNDITVGFFGNTTLQQVNASIPDIISNFTSNIKNIYNLGARSFWIHNTGPVGCLPLILTNFESAERDKYGCAKSYNEVARSFNQNLKEALAHLRKDLPTAAITYVDIYSAKYSLFRDPKKYGFELPLVACCGYGGKYNFSNSVGCGGTIKVNDNDIFVGSCERPSVRVIWDGVHYTEAANKVVFDQISSGAFTDPPIRLNMACHRK 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian7g00178 398 Gene3D SGNH hydrolase 38 383 IPR036514 -
Vian7g00178 398 CDD SGNH_plant_lipase_like 49 382 IPR035669 -
Vian7g00178 398 PANTHER ZINC FINGER FYVE DOMAIN CONTAINING PROTEIN 35 388 - -
Vian7g00178 398 Pfam GDSL-like Lipase/Acylhydrolase 51 379 IPR001087 GO:0016788
Vian7g00178 398 SUPERFAMILY SGNH hydrolase 185 379 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian7g00178 Vian-Chr7 5864471 5866621 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian7g00178 49 386 Acyl Lipid Metabolism Gene Families AT4G10950 27.089 9.39e-34 128
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian7g00178 - - gmx:100818460 610.142
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian7g00178 7 5864471 5866621 Vian7g00178 7 5864471 5866621 ECH