Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian7g00171 ATGATGGATAAGAAGAGATGGCTGTGGAAGAGAAAGTCTTCTGAGAAGAGCCCTGGTGAAAATGAAAGTTCAGGATCTGTTTCTTCTCATTCCGAGAGGTATTCAGATGAACAGGAGGGACTGAAGGAATCTCCTAGTAGAAGCAATAATTCACCTGATGTCACATCAAAAGCTACTGTCTATGCAGAAGCAGTTGACTATAGTTCATTTATCAATGAACAATTGCCGGAAGAAGTCACCCCTAAAACTGTACCAGCTACAGGCATTGCAAGTGATGGTTCATCAGAGAAAGACAAAAATGGAGAAAATGAAAACATAAAAGATGTAAAGGAAGATATTCTAAATGATGGGTTGAGTAACATGTCGGAGAAGCTATCTGCTGCACTAGTGAATGTCAATGCCAAAGAAGACTTGGTTAAGCAGCATGCCAAAGTTGCTGAAGAAGCTATTGCAGGCTGGGAAAAGGCTGAAAAAGAAGTGGCAGTTTTGAAGAAGCAACTTGACACAGTCATTCTCAGGAATTCAGTTTTGGAAGATCGAGTCACCCATCTAGACGGAGCACTTAAGGAGTGTGTTAGGCAGCTAAGACAGACGAGAGAAGAGCATGAAGAGAGTATTTGTGATGCTGTTGCAAAAAAGACACAAGAATTGGAATCAGCCAAAATTAAACTTCAGAGCAAACTCGCAGAGCTTAAAAAGAAATTAGATGATTCAGAGACCAGGTCTTCAATTGACTTTGATATGTATAGAAAGGTAGAATGTTTGGAGAAAGAGAACATGACTCTCAAGCATGAGATTCTTGTTCAATCAGAAGAGCTGGAAATCAGGACAATTGAGAGGGATCTAAGCACTCAAGCTGCTGAGACAGCTAGCAAGCAGCATTTGGAAAGCATCAAGAAAGTAGCCAAGCTTGAAGCCGAATGCCGGAGATTGAGGAGTGTGGCTTCTAAAGCTTCCTTAGTTAATGATCATAAATCCGTTGTTCAGTCCTCATTCAGTGTTGAATCTCTAACAGATAGTCAATCAGACAGTGCAGAGCGGCAAACTGCAGTGGAAATTGAAGCTCACAAGATGAATGGATCAGAACCAAACAAGTTTGAGCCAAGTTGTTCTGACTCGTGGGCATCTGCACTAATTGCCGAGCTTGATCAGTTCAAGAATGAAAAGTGCAGACAAACTCCATCCCGTTCTGTTAAACTTGATCTCATGGACGATTTTCTTGAAATGGAAAGACTTGTTGCATTGCCTGAAACTAAGAAGGAAAGCTTGGTCCAAGAGTCAGTTGTTACCAATCAATCCATAAACAAAGAAAGCTCTCTCAGCGTAGACTTTGAGATCATGAATCAGCACATGGATGAGTTAAAAGAGAAATTAGAGAAGGTGGAAACTGATAAAGCTGAACTAGAGATAGCTTTGATGAAAAGTGAAGAATGTATTGAGGAGTCACAACTTCAGTTGAAGGAAGCAGGAGAGAAATTGGAGGAGTTGCAGAGAGAGCTAGAAAATGCCTACAACTCAAAGCAAAGGGTAGAAGATCATCTACTGGACATAGTGGCTGAGGCTCAGACATTATCTGTGAAGGTTGAATTCTTAGAATCTGAGGTTGATAAGGAGAGGGCCGTCTCCAGTGAGATTGCAATGAAGTTTAGGGACTTGGAGGAAGAGTTAGAAAGAAAATCTGCAGAGGTTGACACATTAGAAGCAGAGCTTGATAAGAAGAAGGTTGTGTCAAATAAAATTGCCATGAAGTGTAAGGACCTGGAGAAAGAGCTAGAAAGTAAATCCGACAAGGTTGACTTGTTAGAAGCAGAGGTTGCTAAGGAAAGGGAGGAGTCAGATAAAATTGCAAAAAGGTTGAAGGACATGGAGGAAGTGCTAGACAGCAAATCTGCAAAGGTTGAAGTATTAGAAGCAGAAGTTGCTAAGGAGAGGGATGTGTCTGATAAAATTGCGAAAAAGTGTAAGGACCTGGAGGAAGTTCTAGAGAGCAAATCTGAAAAGGTTGAGTTATTAGAAGCAGAAGTTGATAAAGAGAGGACTGTGTCAGATAAAATTTCATTGAGGTGTAAGGACCTGGAGGAGAAGCTGGAAAGCAAATCTGCAAAGGTTGATTTGTTAGAAGAAGAGGTTCATAAGGAGAGGACTACTTCAAAAGAAATTGCAATGAAGTGTAGGAAATTGGAGGAAGAATTGCTCAGGTCAACTGCTAGCTCATATGGAGAAAAGAAGATTAAGCAGGAGGACCTAGCACTGGCCGCTGGAAAGCTTGCTGAGTGCCAGAAAACCATAGCATCATTGGGAAATCAGTTGAAATCTCTGGCTACACTAGAAGATTTCCTTATTGACACTGCAAGCATTCCTGCAAGTCCATCACTCATTGCTCAGGCTGGTGGGGAGATGTGGAAGTTGCATTCCAATGGCACATTTTCACCCAAAAGAGATTCCATTTCTTCAAGGTTGGCTGATGGTAGCTCTTGTCCACCCTTGAACAAAAATGAGGAGACCTCACCACTTTCATCATCTTCATCAACATCATCACCAGCTATGCCAAATCATGTCAGTTCTGAGAGGAGTAGAAATGGCTTTGCAAAATTTTTCTCTAGAACCAAGAGTGGAATCCGGCTAGAAATTTAG 2634 0.4138 MMDKKRWLWKRKSSEKSPGENESSGSVSSHSERYSDEQEGLKESPSRSNNSPDVTSKATVYAEAVDYSSFINEQLPEEVTPKTVPATGIASDGSSEKDKNGENENIKDVKEDILNDGLSNMSEKLSAALVNVNAKEDLVKQHAKVAEEAIAGWEKAEKEVAVLKKQLDTVILRNSVLEDRVTHLDGALKECVRQLRQTREEHEESICDAVAKKTQELESAKIKLQSKLAELKKKLDDSETRSSIDFDMYRKVECLEKENMTLKHEILVQSEELEIRTIERDLSTQAAETASKQHLESIKKVAKLEAECRRLRSVASKASLVNDHKSVVQSSFSVESLTDSQSDSAERQTAVEIEAHKMNGSEPNKFEPSCSDSWASALIAELDQFKNEKCRQTPSRSVKLDLMDDFLEMERLVALPETKKESLVQESVVTNQSINKESSLSVDFEIMNQHMDELKEKLEKVETDKAELEIALMKSEECIEESQLQLKEAGEKLEELQRELENAYNSKQRVEDHLLDIVAEAQTLSVKVEFLESEVDKERAVSSEIAMKFRDLEEELERKSAEVDTLEAELDKKKVVSNKIAMKCKDLEKELESKSDKVDLLEAEVAKEREESDKIAKRLKDMEEVLDSKSAKVEVLEAEVAKERDVSDKIAKKCKDLEEVLESKSEKVELLEAEVDKERTVSDKISLRCKDLEEKLESKSAKVDLLEEEVHKERTTSKEIAMKCRKLEEELLRSTASSYGEKKIKQEDLALAAGKLAECQKTIASLGNQLKSLATLEDFLIDTASIPASPSLIAQAGGEMWKLHSNGTFSPKRDSISSRLADGSSCPPLNKNEETSPLSSSSSTSSPAMPNHVSSERSRNGFAKFFSRTKSGIRLEI 877
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian7g00171 877 MobiDBLite consensus disorder prediction 72 105 - -
Vian7g00171 877 Pfam Filament-like plant protein, long coiled-coil 669 775 IPR008587 -
Vian7g00171 877 Pfam Filament-like plant protein, long coiled-coil 248 317 IPR008587 -
Vian7g00171 877 Pfam Filament-like plant protein, long coiled-coil 135 239 IPR008587 -
Vian7g00171 877 Pfam Filament-like plant protein, long coiled-coil 367 435 IPR008587 -
Vian7g00171 877 SUPERFAMILY Tropomyosin 583 775 - -
Vian7g00171 877 Coils Coil 252 272 - -
Vian7g00171 877 Coils Coil 584 716 - -
Vian7g00171 877 Coils Coil 210 241 - -
Vian7g00171 877 PANTHER FILAMENT-LIKE PLANT PROTEIN 4 2 562 - -
Vian7g00171 877 MobiDBLite consensus disorder prediction 812 860 - -
Vian7g00171 877 MobiDBLite consensus disorder prediction 1 18 - -
Vian7g00171 877 Coils Coil 444 513 - -
Vian7g00171 877 MobiDBLite consensus disorder prediction 1 57 - -
Vian7g00171 877 Coils Coil 542 576 - -
Vian7g00171 877 Coils Coil 877 877 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian7g00171 Vian-Chr7 5751762 5756009 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian7g00171 - - aprc:113847186 1290.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian7g00171 7 5751762 5756009 Vian7g00171 7 5751762 5756009 ECH