Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian7g00071 ATGGCCTCAATCTCAGGCATTTGCTCATCCTCCCCAACTCTCAACCACCAAAACCACTCCACCCCAAAACGACGTCGCACCCCTCTCCCCTCATTCCCCTCCCGCCCCAAACCCTTCCCCCCTCGCTCCCTCGCGCGTGAGGCTCCCGCGCAACTCTCCTCGATAACAAAACCGCACCACGCGGGACTTGAGAAGGACTCACGCGCCCTATGGCACCGTTACGTGGAGTGGCTTTACCAGCACAAGGAGCTCGGCCTCTACCTGGACGTCAGCCGGGTCGGGTTCACCGACGAGTTCGTCCGCGAAATGGAGCCCGGCTTCCAGGCGGCGCTCCGTGCCATGGAGGACCTCGAGAAGGGCGCCATCGCGAACCCTGATGAGGGACGCATGGTTGGCCACTACTGGCTCAGGGACTCCTCGCGGGCGCCCACCGCGTTCCTCAAAACGCAGATTGATAACACGCTCGACGCCATTTGCAGCTTCGCGAACGACGTCGTCAGCGGTAAGATTAAGCCGCCGTCGTCGCCGGAGGGGAGGTTTACGCAGATACTTTCGGTTGGGATCGGAGGCTCCGCACTTGGACCGCAGTTTGTGGCGGAGGCGCTGGCTCCGGATAATCCTCCACTCAAGATAAGATTTATTGACAACACGGATCCTGCTGGAATTGATCATCAAATTGCACAACTTGGGCCTGAACTAGCTTCGACACTTGTACTAGTAATTTCGAAGAGTGGTGGTACCCCAGAGACTAGAAATGGCTTGCTAGAAGTGCAGAAAGCTTTCCGTGAAGCTGGATTGAATTTCCCAAAACAGGGTGTTGCTATAACACAAGAAAATTCTCTGTTGGATAACACTGCAAGAATCGAGGGCTGGTTAGCTAGATTTCCCATGTTTGACTGGGTGGGAGGTAGAACATCAGAGATGTCTGCGGTTGGCCTGCTTCCAGCAGCCCTTCAGAGCATTGACATCAGAGAAATGCTTGCTGGTGCGGCATTAATGGATGAGGCAAATAGAAGTACTGTGATAAGGAATAATCCTGCAGCTTTGCTGGCTTTATGTTGGTATTGGGCTACAGATGGTGTAGGATCAAAAGATATGGTTATCCTTCCATATAAGGACAGCTTGTTATTATTTAGTCGATACTTGCAACAATTGGTCATGGAATCTCTTGGCAAGGAGTTTGACTTGGATGGTAATCGGGTTAACCAAGGAATTAGTGTCTATGGAAATAAAGGAAGCACGGATCAGCATGCCTATATTCAGCAACTGAGGGAAGGTGTGCACAATTTTTTTGTGACATTCATTGAGGTGCTACGCGATAGACCACCTGGTCACGATTGGGAGCTTGAACCAGGTGTCACATGTGGTGACTACCTGTTTGGTATGCTACAGGGAACAAGGTCAGCCCTGTATGCCAATAACCGTGAATCCCTCACAGTCACGGTGCAAGAAGTGAACCCCAGATCAGTTGGGGCCCTAATAGCCCTTTATGAACGGGCTGTTGGAATATATGCCTCGATTGTTAACATAAACGCGTATCACCAACCTGGTAAGCTGTACACATTTGACATCTACTGCAAGGAACCTGTCGAACCATTAACACTTGAAGAAGTCGCTGACCGTTGCCATGCCCCAGAAGATATTGAAATGATTTACAAGATTATTGCTCATATGGCTGCCAACGATAGAGCACTAATTGCTGAAGGTAACTGTGGTTCTCCACGGAGCATTAAGGTTTTTCTTGGGGAGTGTAATCTTGATGAACTGTACGCATGA 1776 0.5068 MASISGICSSSPTLNHQNHSTPKRRRTPLPSFPSRPKPFPPRSLAREAPAQLSSITKPHHAGLEKDSRALWHRYVEWLYQHKELGLYLDVSRVGFTDEFVREMEPGFQAALRAMEDLEKGAIANPDEGRMVGHYWLRDSSRAPTAFLKTQIDNTLDAICSFANDVVSGKIKPPSSPEGRFTQILSVGIGGSALGPQFVAEALAPDNPPLKIRFIDNTDPAGIDHQIAQLGPELASTLVLVISKSGGTPETRNGLLEVQKAFREAGLNFPKQGVAITQENSLLDNTARIEGWLARFPMFDWVGGRTSEMSAVGLLPAALQSIDIREMLAGAALMDEANRSTVIRNNPAALLALCWYWATDGVGSKDMVILPYKDSLLLFSRYLQQLVMESLGKEFDLDGNRVNQGISVYGNKGSTDQHAYIQQLREGVHNFFVTFIEVLRDRPPGHDWELEPGVTCGDYLFGMLQGTRSALYANNRESLTVTVQEVNPRSVGALIALYERAVGIYASIVNINAYHQPGKLYTFDIYCKEPVEPLTLEEVADRCHAPEDIEMIYKIIAHMAANDRALIAEGNCGSPRSIKVFLGECNLDELYA 591
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian7g00071 591 PRINTS Glucose-6-phosphate isomerase signature 295 313 IPR001672 GO:0004347|GO:0006094|GO:0006096
Vian7g00071 591 PRINTS Glucose-6-phosphate isomerase signature 505 518 IPR001672 GO:0004347|GO:0006094|GO:0006096
Vian7g00071 591 PRINTS Glucose-6-phosphate isomerase signature 183 202 IPR001672 GO:0004347|GO:0006094|GO:0006096
Vian7g00071 591 PRINTS Glucose-6-phosphate isomerase signature 371 392 IPR001672 GO:0004347|GO:0006094|GO:0006096
Vian7g00071 591 PRINTS Glucose-6-phosphate isomerase signature 473 491 IPR001672 GO:0004347|GO:0006094|GO:0006096
Vian7g00071 591 PRINTS Glucose-6-phosphate isomerase signature 491 505 IPR001672 GO:0004347|GO:0006094|GO:0006096
Vian7g00071 591 FunFam Glucose-6-phosphate isomerase 320 512 - -
Vian7g00071 591 MobiDBLite consensus disorder prediction 29 43 - -
Vian7g00071 591 MobiDBLite consensus disorder prediction 1 59 - -
Vian7g00071 591 PANTHER GLUCOSE-6-PHOSPHATE ISOMERASE 3 590 IPR001672 GO:0004347|GO:0006094|GO:0006096
Vian7g00071 591 CDD SIS_PGI_1 152 318 IPR035476 -
Vian7g00071 591 FunFam Glucose-6-phosphate isomerase 135 318 - -
Vian7g00071 591 SUPERFAMILY SIS domain 59 517 IPR046348 GO:0097367|GO:1901135
Vian7g00071 591 CDD SIS_PGI_2 364 517 IPR035482 -
Vian7g00071 591 Gene3D - 169 314 - -
Vian7g00071 591 MobiDBLite consensus disorder prediction 1 18 - -
Vian7g00071 591 ProSiteProfiles Glucose-6-phosphate isomerase family profile. 29 517 IPR001672 GO:0004347|GO:0006094|GO:0006096
Vian7g00071 591 Hamap Glucose-6-phosphate isomerase [pgi]. 83 532 IPR001672 GO:0004347|GO:0006094|GO:0006096
Vian7g00071 591 Gene3D - 315 514 - -
Vian7g00071 591 Pfam Phosphoglucose isomerase 470 517 IPR001672 GO:0004347|GO:0006094|GO:0006096
Vian7g00071 591 Pfam Phosphoglucose isomerase 114 439 IPR001672 GO:0004347|GO:0006094|GO:0006096
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian7g00071 Vian-Chr7 3009798 3015330 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian7g00071 K01810 - gmx:100809452 1075.08
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian7g00071 7 3009798 3015330 Vian7g00071 7 3009798 3015330 ECH