Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian7g00063 ATGAGAGAGAACCATCCTTCCACAAACTCCGAGGAAGACCAGCGATCCTCCGTGCTGGATCTGGCGCGAGCTGAAATCACGGAATCCTCCACCTCCAAGACCCGAAACTACGGCGGGTTTCCGGATCCGGCTTCCGGGTCGGGTTCATCGGAGCCGCAGGCTCCGTTCCCGGACCAGGTGCTGGAAAACGTGCTGGAGAACGTGCTCCACTTCCTCTCCTCGCGCCGCGACCGCAACGCCGCCTCATTGGTGTGCCGCTCCTGGTACCGCGCGGAGGCCCTCACCCGATCCGAGCTCTTCATCGGGAACTGCTACTCTCTCTCCCCCGCCCGCGCCACCACGCGTTTCACGCGCGTCAAGTCCGTCACCGTGAAGGGTAAGCCGCGCTTTGCGGACTTCGATCTGATGCCACACGATTGGGGGGCCCACTTCACTCCTTGGGCCAGCGCCTTGGCCCAGGCCTACCCCTGGCTGGAGAAGCTCCATCTCAAACGCATGACCGTCACGGACGACGACCTCGACCTCATCGCCGACTCCTTCTCAGGCTTCCGCGAACTCGTCCTCGTCTGCTGCGAGGGCTTTAGCACTCACGGTCTCGCCTCCGTCGCTGCCAAGTGCAGACTGCTGAGGGTGCTTGAGCTGGTCGAATCTGTTGTGGACTCTGAGGACGAGGAGGAGATTGCGGATTGGATTATATGTTTCCCCGAGAGCCAAATCAACATGGAGTCTCTTGTGTTTGATTGCGTTGAGTGTCCTATTAATTTCGAGGCTTTGGAGAGTTTGGTGGCTAGGTCGCCTCGTTTGAAGAAGCTTCGGTTGAACCGATATGTTTCCATGGCTCAGCTGCATCGTTTGCTACTTCGAGCCCCGCAGCTTACTCACCTTGGAACAGGCTCCTTCAGTGCTGCTGAGCCCGGGGTGGTTGGCGAGCTGGAACCGGATTACACGGCAGCGTTTGAGGCCTGCAGATCCTTGGTTTGCCTGTCTGGATTCAGGGACATTTGGGCGGATTACCTTCCCGCAATTTATCCGGTCTGCGCCAATCTAACCTCGTTGAATTTGAGCTATGCCGATGTTAACGCGCAGCAGCTGAAGGCAGTTATTCGCCACTGTCATAAGCTACAGATATTCTGGGTACTTGATTCGATACGTGATGAAGGACTTCAGGCAGTGGCTGCTACTTGCAAGGACTTGCGAGAGCTTCGGGTTTTTCCTGTGGATGCAAGGGAGGATACTGAAGGGCCTGTCTCTGAGGTTGGGTTAGAAGCGATTTCGCAGGGTTGTAGGAAGTTGGAGTCGATTTTGTATTTCTGCCAGAGGATGACTAATGCGGCTGTGGTGGCTATGTCAAAGAACTGCCCAGATCTTGTGGTGTTTCGTCTGTGTATTATTGGGCGGTATAGGCCAGATCCTGTGACTCAGGAACCCATGGATGAGGGTTTTGGTGCTATTGTTATGAATTGCAAGAAGCTCACTAGGCTAGCTGTGTCTGGTTTGCTCACTGATCGTGCTTTTGAGTACATTGGGAGGTATGGGAAATTGGTTAGGACACTGTCGGTTGCCTTTGCTGGGGACACCGACACGGGCCTTAAGTATGTGCTTGAAGGATGCCCTAATTTGCAAAAGCTTGAAATCAGGGATAGTCCTTTTGGGGATGGAGCTCTTCGATCTGGTTTGCATCATTACTACAACATGAGATTCCTCTGGATGTCGAGCTGCAAATTGACACGCCAAGCTTGCCAAGAGATTGCACAAGCATTGCCCAATCTTGTTTTGGAAGTGATCAGCAACAGTGTGGAGAATGCAGGTGATGATATTGAGATATTGTACATGTATCGGTCACTTGATGGACCGCGGGATGATGCTCCAGGATTTGTTAACATTCTGCATTAG 1893 0.5378 MRENHPSTNSEEDQRSSVLDLARAEITESSTSKTRNYGGFPDPASGSGSSEPQAPFPDQVLENVLENVLHFLSSRRDRNAASLVCRSWYRAEALTRSELFIGNCYSLSPARATTRFTRVKSVTVKGKPRFADFDLMPHDWGAHFTPWASALAQAYPWLEKLHLKRMTVTDDDLDLIADSFSGFRELVLVCCEGFSTHGLASVAAKCRLLRVLELVESVVDSEDEEEIADWIICFPESQINMESLVFDCVECPINFEALESLVARSPRLKKLRLNRYVSMAQLHRLLLRAPQLTHLGTGSFSAAEPGVVGELEPDYTAAFEACRSLVCLSGFRDIWADYLPAIYPVCANLTSLNLSYADVNAQQLKAVIRHCHKLQIFWVLDSIRDEGLQAVAATCKDLRELRVFPVDAREDTEGPVSEVGLEAISQGCRKLESILYFCQRMTNAAVVAMSKNCPDLVVFRLCIIGRYRPDPVTQEPMDEGFGAIVMNCKKLTRLAVSGLLTDRAFEYIGRYGKLVRTLSVAFAGDTDTGLKYVLEGCPNLQKLEIRDSPFGDGALRSGLHHYYNMRFLWMSSCKLTRQACQEIAQALPNLVLEVISNSVENAGDDIEILYMYRSLDGPRDDAPGFVNILH 630
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian7g00063 630 MobiDBLite consensus disorder prediction 23 38 - -
Vian7g00063 630 Gene3D - 50 96 - -
Vian7g00063 630 Gene3D Ribonuclease Inhibitor 98 629 IPR032675 -
Vian7g00063 630 CDD F-box_AtTIR1-like 58 96 - -
Vian7g00063 630 MobiDBLite consensus disorder prediction 1 56 - -
Vian7g00063 630 SUPERFAMILY RNI-like 150 605 - -
Vian7g00063 630 Pfam F-box 58 97 IPR041567 -
Vian7g00063 630 PANTHER F-BOX/TPR REPEAT PROTEIN POF3 137 580 - -
Vian7g00063 630 SUPERFAMILY F-box domain 56 91 IPR036047 GO:0005515
Vian7g00063 630 FunFam Transport inhibitor response 1-like protein 51 96 - -
Vian7g00063 630 SMART LRR_CC_2 488 511 IPR006553 -
Vian7g00063 630 SMART LRR_CC_2 537 561 IPR006553 -
Vian7g00063 630 SMART LRR_CC_2 428 452 IPR006553 -
Vian7g00063 630 SMART LRR_CC_2 180 205 IPR006553 -
Vian7g00063 630 FunFam Transport inhibitor response 1 97 629 - -
Vian7g00063 630 Pfam Transport inhibitor response 1 protein domain 118 163 IPR041101 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian7g00063 Vian-Chr7 2549254 2551392 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian7g00063 - - gmx:100807836 1081.63
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian7g00063 7 2549254 2551392 Vian7g00063 7 2549254 2551392 ECH