Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian7g00057 ATGGGCGATTTTACGGTTGCGTTAAACCCTCCCAAAACCTTCGGCCCCGAGATTCTACCACCCATCAGTCGCACTTCCGCGGCGGCGCGTGGGCGCGTAACCAAAATCTCTTTCAAACCGCACGGATTTCGAGCAATCCGCGCCTCGGTGATGCCGAGTGAAGGCCAGCAACACTCGTCTCTGGGAGACTCTCTCGTGAACAGTCCGCACAGAAACGACGTCGTTGATGTTATCAGAAGGAGCGCAATCTCTAACTGCCTCTCCGAAACTAATCTTCACAACACCGTTCCTGGTCTCCTGTCCAAAACCCGCGGCAAAGTTCGAGATATTTACGACGCCGGGGATTACCTCGTTTTGGTGACCACTGATCGGCAGAGTGCGTTTGATAGGATTCTTGCTTCCATTCCTTTCAAAGGCCAGGTTTTGAATGAGACAAGTTTGTGGTGGTTTGAAAGAACTAAGCAGATAGTTCCTAATGCAGTAGTATCGGCTCCGGATAAAAATGTTACAATAGCTAAGAAATGCTCAGTTTTCCCTGTTGAGTTTGTTGCAAGAGGATTTGTAACTGGAAGTACTGATACATCTCTATGGACAGTCTACAATAAGGGTGCTCGGAACTATTGTGGAAATGTCCTCCCAGATGGAATGGTAAAAAATCAGAAGTTGTCTGAAAATATACTCACTCCAACAACCAAAGCTGCAGATCATGATGTTCCTGTCACTCCAGAGGAGCAAGTGGCTTCAGAGCATGGCCTCATATTGGTAGATACTAAGTATGAGTTTGGGAAGGCAAATGATGGTTCAATTATGTTGATCGATGAGGTCCATACTCCTGATTCAAGTAGATATTGGATTGCCAGTTCTTACCTGGAGCGCTTTCAAAATGGTCTTGAGCCTGAAAATATTGACAAGGAGTTCTTGAGGCTGTGGTTTAAAAGTCACTGCAACCCGTATGAAGATGAGGTCCTTCCCGATGCTCCCGAAGATCTTGTTTGTGAGTTATCCTGGCGATACATTTTCTTGTACGAGACTATAACAAACTCAAAGTTTGAGATGCCATTGACCGAGGAGCCTATACATGACCGAATTTCTCGAAATGTTGCATCTGCACTGTCATCTTTAAAGTAG 1128 0.4583 MGDFTVALNPPKTFGPEILPPISRTSAAARGRVTKISFKPHGFRAIRASVMPSEGQQHSSLGDSLVNSPHRNDVVDVIRRSAISNCLSETNLHNTVPGLLSKTRGKVRDIYDAGDYLVLVTTDRQSAFDRILASIPFKGQVLNETSLWWFERTKQIVPNAVVSAPDKNVTIAKKCSVFPVEFVARGFVTGSTDTSLWTVYNKGARNYCGNVLPDGMVKNQKLSENILTPTTKAADHDVPVTPEEQVASEHGLILVDTKYEFGKANDGSIMLIDEVHTPDSSRYWIASSYLERFQNGLEPENIDKEFLRLWFKSHCNPYEDEVLPDAPEDLVCELSWRYIFLYETITNSKFEMPLTEEPIHDRISRNVASALSSLK 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian7g00057 375 CDD SAICAR_synt_Sc 104 346 - -
Vian7g00057 375 Gene3D - 246 309 - -
Vian7g00057 375 ProSitePatterns SAICAR synthetase signature 2. 254 262 IPR018236 GO:0004639|GO:0006164
Vian7g00057 375 PANTHER PHOSPHORIBOSYLAMINOIMIDAZOLE-SUCCINOCARBOXAMIDE SYNTHASE 47 244 - -
Vian7g00057 375 Pfam SAICAR synthetase 103 246 IPR028923 -
Vian7g00057 375 Pfam SAICAR synthetase 244 321 IPR028923 -
Vian7g00057 375 ProSitePatterns SAICAR synthetase signature 1. 177 191 IPR018236 GO:0004639|GO:0006164
Vian7g00057 375 SUPERFAMILY SAICAR synthase-like 101 350 - -
Vian7g00057 375 Gene3D Phosphorylase Kinase; domain 1 89 178 - -
Vian7g00057 375 Gene3D - 179 245 - -
Vian7g00057 375 FunFam Phosphoribosylaminoimidazole-succinocarboxamide synthase 89 181 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian7g00057 K01923 - gmx:100801209 643.269
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian7g00057 7 2443709 2450823 Vian7g00057 7 2443709 2450823 ECH