Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian7g00009 ATGTCTAGGCCTCTGCAAAGAGGTGTGTCTGGTGGGGTTAGGTTCCCTGAGAGTGGCCATGACTTGTGGGACTCCCAATCTAAGGATAAACCAGAAAAGGAAGATTTTGATAAGAGGGGTTCTTCAGATCATAGCCCTTTTGCTTTGAGGTTTCCTTTGAGGTTGCTTCTGGGAAATAATTCTGATTCCAAATATGGCAATGGCATTGGTGAGAATGGTTTTGCATCCGATTCCTTCATCGTTAGCTCCCCGCGGAACCGGCTTAAGCTGATGCTGCTTTCTTTGAAGTTTAGTTTAGTGTTCATAGTTGTTCTGGCTATTACTGGATCTTTTTGGTGGACTTTATCGATTTCATCCTCGTCAAGAGATCACATTTACCATGGTTATAGAAGGCTTCAAGAGAAGCTAGTCTCAGACCTTTTGGATATTGGTGAGTTTTCTCGCGGTCCGTTGAGGTTGAAGGAATCGGAATTCTGTCCTCAGGAATTGGAAAACTTTGTTCCTTGCTACAATGTTTCTGAGAATGTGGAATTGGAAGTTTCTGATAGCAACGAAATTGACCGGCAATGTGGTCATGAGCCTAGGCAGAATTGTTTAGTTCTGCCACCCGTGAATTACAAAATTCCTTTAAGGTGGCCTACTGGAAAAGATGTTATCTGGGTTGCTAATGTGAAGATCACAGCACAGGAAGTTCTTTCTTCTGGAAGCTTGACAAAGAGGATGATGATGCTGGACGAAGAGCAAATTTCATTTCGTTCAGCCTCTCACATGTTTGATGGTGTAGAAGACTACTCACATCAAATTGCTGAAATGATTGGACTTAGAAATGAATCTTATTTAATACATGCTGGGGTTCGAACTATACTAGACATAGGTTGCGGCTATGGTAGCTTTGGAGCACATCTCTTTGACGGTCAGCTTTTAACTATGTGCATTGCAAACTATGAGCCTTCTGGCAGTCAAGTTCAGCTTACTCTCGAGAGGGGTCTTCCTGCTATGATTGCTTCTTTCACTTCGAAGCAGCTGCCATTTCCATCTCTATCCTTTGATATGTTACATTGTGCCAGATGTGGCATTGATTGGGACCAGAAAGATGGCATGCTCCTGATTGAAGCAGATAGACTTTTAAAACCGGGTGGGTACTTTGTTTGGACATCACCACTAACAAATGCTCGTAACAAAGAGAATCAGAAAAGATGGAAGTTTATACAGGATTTTACATTAACTCTTTGCTGGGAACTCCTGTCGCAACAAGATGAAACTGTAGTATGGAAGAAAACCAGTAAAAAAGGTTGCTATGGTTCAAGAAAGTCAGGTTCTGGCCCTTCTTTGTGTGGTAGAGGTATTGACGTGGAGACTCCACATTATCGAGAACTGCAAAACTGCATAGGAGGAATGCAGAGCGCTCGTTGGATTCCAATTGAGAAAAGGGAAAGATGGCCTTCTCGTGCTAACTTGAACAAGAACGAGTTAGCTATATACGGGTTGCAGCCTGATGAACTTACTGAGGACTCTGACAGCTGGAAAACAGCAGTCCAGAATTATTGGTCTCTTCTGTCACCTTTGATATTCTCTGATCATCCAAAGAGGCCGGGCGATGAGGACCCTTCACCCCCTTACAACATGCTCAGAAACGTGTTGGACATGAATGCCCATTTTGGTGGCTTTAATTCTGCATTGCTGCAAGCTAGAAAGTCTGTGTGGGTGATGAATGTTGTCCCAATAAATGGACCCAATTATCTTCCCTTGATCCAGGACAGAGGATTTGTTGGCGTTCTCCATGATTGGTGTGAGGCTTTTCCGACATACCCTAGAACCTATGACTTGGTGCATGCAGCAGGATTTCTATCCCTTGAAACTGAGCAGCACAGGTGTACCATGGTTGACATGTTCCTTGAAATTGACAGAATACTTCGCCCAGAGGGTTGGGTTATAATTCGTGACACAGTTCCCTTAATAGAATCAGCCAGAGCTCTAACAGCACAGCTGAAGTGGGATGCAAGAGTGGTAGAAATTGAAAGTGACAGTGATCAGAGACTCCTGATCTGCCAGAAACCTTTCTTTAAGAGACAGGCAAGCTAA 2082 0.4352 MSRPLQRGVSGGVRFPESGHDLWDSQSKDKPEKEDFDKRGSSDHSPFALRFPLRLLLGNNSDSKYGNGIGENGFASDSFIVSSPRNRLKLMLLSLKFSLVFIVVLAITGSFWWTLSISSSSRDHIYHGYRRLQEKLVSDLLDIGEFSRGPLRLKESEFCPQELENFVPCYNVSENVELEVSDSNEIDRQCGHEPRQNCLVLPPVNYKIPLRWPTGKDVIWVANVKITAQEVLSSGSLTKRMMMLDEEQISFRSASHMFDGVEDYSHQIAEMIGLRNESYLIHAGVRTILDIGCGYGSFGAHLFDGQLLTMCIANYEPSGSQVQLTLERGLPAMIASFTSKQLPFPSLSFDMLHCARCGIDWDQKDGMLLIEADRLLKPGGYFVWTSPLTNARNKENQKRWKFIQDFTLTLCWELLSQQDETVVWKKTSKKGCYGSRKSGSGPSLCGRGIDVETPHYRELQNCIGGMQSARWIPIEKRERWPSRANLNKNELAIYGLQPDELTEDSDSWKTAVQNYWSLLSPLIFSDHPKRPGDEDPSPPYNMLRNVLDMNAHFGGFNSALLQARKSVWVMNVVPINGPNYLPLIQDRGFVGVLHDWCEAFPTYPRTYDLVHAAGFLSLETEQHRCTMVDMFLEIDRILRPEGWVIIRDTVPLIESARALTAQLKWDARVVEIESDSDQRLLICQKPFFKRQAS 693
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian7g00009 693 CDD AdoMet_MTases 287 383 - -
Vian7g00009 693 MobiDBLite consensus disorder prediction 21 44 - -
Vian7g00009 693 PANTHER SAM-DEPENDENT METHYLTRANSFERASE 97 688 IPR004159 GO:0008168
Vian7g00009 693 MobiDBLite consensus disorder prediction 1 44 - -
Vian7g00009 693 Pfam Putative S-adenosyl-L-methionine-dependent methyltransferase 165 685 IPR004159 GO:0008168
Vian7g00009 693 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 282 424 IPR029063 -
Vian7g00009 693 Gene3D Vaccinia Virus protein VP39 243 424 IPR029063 -
Vian7g00009 693 FunFam probable pectin methyltransferase QUA2 247 427 - -
Vian7g00009 693 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 498 652 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian7g00009 Vian-Chr7 619371 623549 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian7g00009 K23870 - gmx:100805992 1295.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian7g00009 7 619371 623549 Vian7g00009 7 619371 623549 ECH