Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian7g00003 ATGCAGAAGAAGCTAGCATTCCCAGTCTCCAAGAGCCTGGACCAATTCAAATCGTTGTACGGTTCAATTTCGGGAGCTTCCAAGCCATTATCTTCGCGTCCTTCTGTGGATACCGTTTCATCGGGGAGTTTTGCAAACCTGAAGCTCACCGCAGAGAAATTGGTGAAAGAGCAAGCTTCGGCGAAGACTGATCTTGAAAATGCGAATGCTAAGCTTAAGAAGTCGCAGGCGTGTGTGCGCGCATTGGAAGAAAAATTGCAGAATGCTTTAAACGAAAATGCCAAGCTCCAGGTCAAGCAGAAGGAAGATGAGAAACTGTGGAAGGGATTGGAGTCTAAGTTCTCTTCTACTAAGACTTTATGTGATCAACTTACGGAGACTTTACAGAACTTGGCTGGTCTGGTTCAGGATGCCGAAAAAGATAAGGAGACATTGGAAAATAAACTGTCAGCAAGTTCAAAAACTCTTGATAGCTTGAGTAAACAGATGGATGGTTTATCTTTGAAGCTAGATTCTGCACAGGAAGCAATTAGAACCCGTGATAACGAACTAGAGAAGCTCAAGTTTGCTTCAGAAGAAAAGGAGAAATTTCACAGAGATGAACACTGCAGAGTTGCCAATGTTATAGAAGAGAAAGATAATATGATAAGGAATTTAGAAGAAATGTTAGCATCTAGTAGATTGGCTACAGAGAATTTGAACTCAACTTTGGAAGAGGTTCACCTTCAGTTAAAAGTTAAAGAAGATGAAATTATGCGTCACATAACCTGTCAAGAGAAATTGGAGAAAGAAAAGAGTGATCTTCAATTGCTGAATACCGGGCTTGCAGAAAAGCATGACATGTCACTTCAGGAAATTGAAAACCTTAACGAAACACTTCAGTCTTTGGCTGCAGATTTGTCAAATTTAGACAAAGAAAGCCTGAATCTTTTGAGCAAGTTTGATGAAATGAATTTACTCTATGCTTCTGGCTTCCAGTTGGTTCAGAAGGAGAGAGAAACTTTCTCAAAACATGCTCAATACCAGTATAGTGAGCTTAATAACAAATTTGTAGTCTTGGAATTAGAAAAGAACGCAACTCAAATGAAAAACTACGAGTTAAACAAAACTGTGGATGAACTTCAGAAAGTTCAAGAATCTACGGTAGCCCAACTTACAGAGGACTCTCGATTAGCTGCTGAGAGAATTCAAAGTTTGGTGTCAGAAACTGAGACTTTAATCTCAAAAAAGAAAGAAGCAGAGGTATTAATTTCCAAATTAGAAGAGAAAGTTGAACTTCTATTAGAAAGTTCTAGATCATCAGACAAGCACGTGCAAGACTTGCTGCTGAAGGTTTCAGCATTAGAGACTGAAAGCAAAGAAAATACCGAAAGACTACAGGCAGAGATATTGAAGAAATCAGAGGAAATAGATACTTTGCAAAATGAGAGAATAAAACTAGAGAAGCATGCTGGTTCTCTAGATCAAGAAGTAATCCAGCTTCATAATGCCCTGGAGGAAAAAGAACAGTGTGTTTTACATTGTAAGGAACAGGAAAAGAAGCTACAAGATCAAATCACAGAGAACGTATCATTGTTGACTGCTGTTGAAAGCAAACTTTCAGAAGCTAGGAAGCAATATGATCAAATGGTAGAGAATAAACAGTTAGAACTATCAAGGCATTTGAAAGAAATATCTCAGAGAAATGATCAGGCTATCAATGACATTAAGAGGAAGTATGAATTGGAGAAGATGGAAATTGTGAATATGGAAAAAGACAAGACAGACAAAACTATTGCCGAAATTGAGGGTAGATGTGATAAAAAAATTGCAGAATGCAACGAAGAATCAAGGCAGCAGTTGATGTGTTTTCAGGAAGAACACACGTTGCTGGTTAATCAAATGCAACAGGAGCATGACAAGAAGCAACTAAGCCTCATAGCTGAGCACAATGAACAGCTAAAGCGTACCCAACTGCTAGCTGAAAATGAACTGCGAGAGAAAACAATCTTTATGAGGAATGATCATGAAGCTCAGATTAAAGCATTGAGATGTGAACTTGAAGATGAATGTCGGAAGCTAGAAGAGGAGTTGCATCTTCAAAAATCCAAAGAAGACAGACAAAGGGCTTTGTTGCAGTTGCAGTGGAAAGTGATGAGTGACAAACCCAAAGAGGACCAAGAAGTGAATTCAAAACAGGTTGATTTGTGTTTCAGTCTCTTTGTCTGCGTCCCTGTCCAAATAGATGCCATATTTGTTAGTTTTCATGTTTGGATACCATTGGACTACTCCATTTCATCAATTAAGAGAAGGAGTTCTTGTGGTGGCAAAAGAAATCTGCAGCGTGACTTAGACTCTCCTTACTTTGAAGCAACACAAACACCAGTGCCAAAGTTGTTGACAAAAGTGGACAACATTAAAACAGGAAGTGCAGTGAGCATACCTAAGCGTCATAGAAAGGATCCTAGAAATCGAAAGATAAATACACCAAAAGTAAATACTCCTGGAAGTGTTGTTAAGAGCATCAAAGGAGGAGGACATACTAATCCTTCAAATATAGGTGATTTGTTTTCAGAAGGGTCTCTTAATCCCTATGCTGATGATCCCTATGCATTTGATTAG 2601 0.3875 MQKKLAFPVSKSLDQFKSLYGSISGASKPLSSRPSVDTVSSGSFANLKLTAEKLVKEQASAKTDLENANAKLKKSQACVRALEEKLQNALNENAKLQVKQKEDEKLWKGLESKFSSTKTLCDQLTETLQNLAGLVQDAEKDKETLENKLSASSKTLDSLSKQMDGLSLKLDSAQEAIRTRDNELEKLKFASEEKEKFHRDEHCRVANVIEEKDNMIRNLEEMLASSRLATENLNSTLEEVHLQLKVKEDEIMRHITCQEKLEKEKSDLQLLNTGLAEKHDMSLQEIENLNETLQSLAADLSNLDKESLNLLSKFDEMNLLYASGFQLVQKERETFSKHAQYQYSELNNKFVVLELEKNATQMKNYELNKTVDELQKVQESTVAQLTEDSRLAAERIQSLVSETETLISKKKEAEVLISKLEEKVELLLESSRSSDKHVQDLLLKVSALETESKENTERLQAEILKKSEEIDTLQNERIKLEKHAGSLDQEVIQLHNALEEKEQCVLHCKEQEKKLQDQITENVSLLTAVESKLSEARKQYDQMVENKQLELSRHLKEISQRNDQAINDIKRKYELEKMEIVNMEKDKTDKTIAEIEGRCDKKIAECNEESRQQLMCFQEEHTLLVNQMQQEHDKKQLSLIAEHNEQLKRTQLLAENELREKTIFMRNDHEAQIKALRCELEDECRKLEEELHLQKSKEDRQRALLQLQWKVMSDKPKEDQEVNSKQVDLCFSLFVCVPVQIDAIFVSFHVWIPLDYSISSIKRRSSCGGKRNLQRDLDSPYFEATQTPVPKLLTKVDNIKTGSAVSIPKRHRKDPRNRKINTPKVNTPGSVVKSIKGGGHTNPSNIGDLFSEGSLNPYADDPYAFD 866
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian7g00003 866 Coils Coil 640 660 - -
Vian7g00003 866 Coils Coil 121 193 - -
Vian7g00003 866 MobiDBLite consensus disorder prediction 837 851 - -
Vian7g00003 866 Coils Coil 205 229 - -
Vian7g00003 866 Coils Coil 666 686 - -
Vian7g00003 866 Coils Coil 456 490 - -
Vian7g00003 866 Coils Coil 526 546 - -
Vian7g00003 866 MobiDBLite consensus disorder prediction 804 853 - -
Vian7g00003 866 Coils Coil 566 586 - -
Vian7g00003 866 PANTHER SYNAPTONEMAL COMPLEX PROTEIN-RELATED 31 721 - -
Vian7g00003 866 Coils Coil 403 430 - -
Vian7g00003 866 SUPERFAMILY Tropomyosin 57 168 - -
Vian7g00003 866 Coils Coil 258 306 - -
Vian7g00003 866 Coils Coil 51 106 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian7g00003 - - gmx:100788684 1335.86
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian7g00003 7 198545 214805 Vian7g00003 7 198545 214805 ECH