Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian6g01915 ATGGAACTAGCTCAGCATAGAGTTAACGAGAATGGGTTGGGCGAGGACAGTGAAACTTCTGCACGGGTTCCTCTCAGGGATCGCCGTGTCTACCCTGGCAATCCTGCAGGCTTGGTGAGGAAGAGGGCTTATATATTTGACGGCACCGGGAACTTTTATAACAAGGATTGGGATCTGGCAGACCTTTTTCAGAAAGAAGAGAAGCAACTGGAGTTACGGGAAGGTAGAGGGAAGGAGTTTTCTTGGTACCATGTGGAATTACCGAAAGGAAATCAGAAGTTGTCACAATCTGCAGAAGACCTGATTGGTGTTTTCTGCCCCCCATTGAAACTCCAAGACATTCTTTCACTTGTTAGCAACGGACCCTTTTGTGCACATGTAGATGGGGCGCTTGTCTTCCGTGTTAATTCGCCTGGTCCTCCCTCCAGTGACTTCACATTTAGGATTGCTGCTAGAGTTAGTGAACATTCAGTAATTACCGTGTCATTGGGACGTGTTCCCAGGTTAGGCTTCTCACGCGTGGGTGAATCTCTTCTATCAGAGATTCCTAGTCTTGAAAGTTCCTCTTTAAGAGGTCAGCAGGAGGAAAGAGGGGGGATAGTTATTAAGGAGCATGTTCTTGAATTCTTATTGACTATGAATCACTCTGAGGAAGCTGACAACCCTGTGCCCAGATCTGTCTCAAATCTTGTAGTTCACATAATTGACACACATGTAGATCAGCTTCAAGATCTTGTGACTAAGCTTGAGATGGAGTTGGACTCTGTGGAGCTGGACTTGGATAAAGGTGGTTATGCTCTGAAGAAACAAATGCTAGATGACAGAAGATTCCCCAAACTGCATATTAATTTGCAGCGTCTCTTGCAGGTGATACTTCACTCATCTGTTCATTCCCTCTTGATAGAATTGTCTTTTGAATTCAGAGATGCAGATAGATCTGGAAGAGGGGAGGTGATTGCCCATGGAGAGCAAGTATATCTCCGAGTCAAAGAAAAATGTTCTTCAAAAAAATGGTTTGCCAGTGATGATCTTAACTCCCTCGAAGAACTAATTGGAAGGTTAAGGAGGATGAAGGAGAATGTAGGGTTTATAGTAAATCGTGTCACAGCAATTCAGGCCGGTTTAGACAGCTGGCAATCGGAGCAAATAAACAGGAAGCTGTATTATCTCTCTTTCCTTTCAATAATATTCCTCCCTTTGTCGATAGTAACAGGAGTCTTTGGCATGAATGTTGGAGGAGTTCCATGGACAGGTCAAAATGCCCCAGAGCTAAAAGATGGTTTTCGCAATGTCATCTTACTCTGCGTTGCAATGTTATTTCTTGTACTGCTCTGTTTCATTTTCCCGGCCCTTTATACTCGTATAGCTGCTGCATGGCGAAATAAGAGGGCTCTGAGAAGAAACTGGTCACTGAACAGGAAGTCATTGCTGAGGAGATCATTGAGAATGGGAGATCAAGACAGAGGAGGCTATCTGCGGATTTAA 1485 0.4424 MELAQHRVNENGLGEDSETSARVPLRDRRVYPGNPAGLVRKRAYIFDGTGNFYNKDWDLADLFQKEEKQLELREGRGKEFSWYHVELPKGNQKLSQSAEDLIGVFCPPLKLQDILSLVSNGPFCAHVDGALVFRVNSPGPPSSDFTFRIAARVSEHSVITVSLGRVPRLGFSRVGESLLSEIPSLESSSLRGQQEERGGIVIKEHVLEFLLTMNHSEEADNPVPRSVSNLVVHIIDTHVDQLQDLVTKLEMELDSVELDLDKGGYALKKQMLDDRRFPKLHINLQRLLQVILHSSVHSLLIELSFEFRDADRSGRGEVIAHGEQVYLRVKEKCSSKKWFASDDLNSLEELIGRLRRMKENVGFIVNRVTAIQAGLDSWQSEQINRKLYYLSFLSIIFLPLSIVTGVFGMNVGGVPWTGQNAPELKDGFRNVILLCVAMLFLVLLCFIFPALYTRIAAAWRNKRALRRNWSLNRKSLLRRSLRMGDQDRGGYLRI 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian6g01915 494 Pfam CorA-like Mg2+ transporter protein 214 447 IPR002523 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Vian6g01915 494 PANTHER OS08G0130000 PROTEIN 6 294 - -
Vian6g01915 494 SUPERFAMILY CorA soluble domain-like 40 373 IPR045861 -
Vian6g01915 494 Gene3D Magnesium transport protein CorA, transmembrane region 379 451 - -
Vian6g01915 494 MobiDBLite consensus disorder prediction 1 28 - -
Vian6g01915 494 SUPERFAMILY Magnesium transport protein CorA, transmembrane region 382 446 IPR045863 -
Vian6g01915 494 Gene3D Magnesium transport protein CorA, transmembrane region 224 378 - -
Vian6g01915 494 Coils Coil 239 259 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian6g01915 - - gmx:100817220 797.349
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian6g01915 6 36364143 36368275 Vian6g01915 6 36364143 36368275 ECH