Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian6g01913 ATGGGTAGTGGCAGTAAGAAGAAGAGTTTCGTGGCCGAGGAACAAACCCTCGCCACCGACGATTCTCCCAAACCGCTCAACAAAAAATTCAAGAACACTGCCGCCTCCGGTGATGGCCAGCAAGAACCTTCAGTCAAGCCAATGGAGAGGAAGAAGAAGCGCAAAGCCTTGGACAAAAAGCGGCGCCGTACGTCATCACAACCGCAACCCGAGCCTGTAGCTTCTGAATCCAAACCAGTACCGAGTACCGCCGGCGGCGCTCTCCCGGAGTTTCACATTGGTGTATTCAAGGACCTTGCGGCGGCGTCCGAGGCGGCGAGGGAAGCCGCCGCAAAACAAATGGTGACGGAGTTGAAGGCGGTTCAGAGCGCCTATGATACGCGTGAGGAGAAGGAGAATGACGAGGGTGGATTCAAGTTGGAAGCAGAGAAAGACGATGGATTGGATAACTGTGCTCCGTCTGTGAGATACGCTGTTCGTAGGCTCATTCGCGGTGTTTCTTCGTCCAGAGAGTGTGCGCGACAAGGCTTTGCATTAGGTTTAACTGTTTTAACTGGCACTGTTCATAACATTAAGGTTGAATCCTTCCTTAAACTTGTAGTCAATTTGCTGGAAGTAACTTCATCAATGAAGGGTCAGGAAGCAAAAGATTGTCTATTAGGGCGCTTATTTGCCTATGGAGCTCTGGCAAGATCAGGAAGACTTATAATGGAGTGGAATATAGATAAAAACACTCCTTACATAAGAGAATTTATTACGGTTCTTATTTCTCTTGCCAATAAAAAGCGATACTTGCAAGAGCCTGTTGTTCTAATAATATTAGATATGGTTGAAAAGTTGCCCGTTGAAGCCTTGGTGAATCATGTTCTTGAAGCTCCAGGGCTGCATGAGTGGTTTGAAGCTGCTATAGAAGTAGGAAACCCTGATACTCTGTTCCTGGCTTTAAAACTTAGAGAGAAGAGCGGTATGGACAGCTCCTTGTTTGGCAAATTACTACCAAATCCATTCAGCTCTAGCCAGCTTTTCTCTGCCGATCACCTGTCCTCTTTAAGTAATTGCTTGAAGGAATCAACATTTTGTCAACCTCGGCTTCATAGTGTCTGGCCAGTTTTGATAAATATTCTTTTACCTAATACTATTGTGCAAATAGAAGATGCAGCATCCGCTTCAAATTCATTAAAGAAACACAAAAAAAGCCGAAAATCTAGCTCTTCTGATGAAGAAATTGCGGGGAATCTTCAGTCTTTTTGTGAAATAATTATTGAAGAATCCCTTCTCATGTCATCTCATGACCGGAAACACTTAGCTTTTGATGTTCTCTTTCTTCTACTCCAAAAGCTGCCTGCGTCATTACTTCCCGTTGTTCTGTCATATAAAGTTGTTCAGTGCATGGTGGACGTACTATCCGCAAAGAACACATGGCTATATAAAGTAGCTCAGCATTTTCTTAAACAGTTGTCAGATTGGGTGGGGGATGACGATGTCAGAAGAGTTGCTGTTATAGTGGCTATTCAGAAGCACAGCAGTGGAAAATTTGATAGTGTAACACGAACAAAACATGTTAAAGATTTTATGTCACAGTTCAAAACTGAACCTGGTTGCATGCTCTTTGTTCAGAACTTAATTAACCTGTTTGTGGATGAAGGTAACGCTGTGGAGGAACCTTCAGACCAGAGTCAAACCACAGATGAAAATTCTGAAATAGGATCTATTGAGGATAAGGATTCTCCCAGGTCCAATGGGAATTCTGACTTTTTGAAGAGTTGGGTTATAGAATCCCTTCCCAGTATTTTAAAATTCTTGAAGCTAGATGATGATGAGAAGTTCCGAGTACAGAAAGAAATCATGAAGTTTCTGGCTGTTCAGGGTCTATTCACTGCCTCTCTTGGCTCTGAGGTAACGTCATTTGAGTTAGTGGAGAAATTCAGATGGCCAAAATCCCCCACATCAAATTCTCTCTGCAAGATGTGTATAAACCAGCTGCAATTGTTATTGGCAAATGCTCAGAAAGGGGAGGGCTCTCGTCCTTTGGCTAATAGTTCTGAGCCAAATGATCTTGGTTCATACTTCATGAAATTCTTTGGCACCTTTTGCAACATTCCTTCTGTTTCCCTCTTCCGGTCTTTAGATGATGTAGATCAAAAGGCAGTAAAAAGTTTGCAGGCAGTGGAAACAAGATTATCCAGAGAGGAACGGAGCCATGATTGTAACACTGATGCTAATAAATTGTTTGCATTGAGATACCTGCTCATCCAACTGCTTCTGCAAGTACTTCTTTGTCCAGGGGAGTACGCCGAAGCTGCATCTGAACTCATTATTTGTTGTAAGAAGGCATTTTCTGGTTCTGATCTTCCTGAGTCCTCTGGAGAAGATGTGGAGGCTGATGATGCTCCCGAACTGATGGATGTTCTTGTGGATACATTACTCTCTCTGCTACCACAATCATCAGCTCCTATGCGATCTTCCATAGAACAGGTATTTAAATATTTTTGTGGTGATATCACTGATGATGGATTGATCCGAATGTTGCGGATCATCAAGAAACAGATAAAGCCTGCAAGACATCCAGATACAGCGAGTGCAGATGATGATGAGGATGATGACGACTTTATTAATATTGAAGATGAAATTGATCAAGCTGAAACAGGTGAGAGTGACGTCCAGACAGATGACTCTGAGTCAGTCGTAGAGGTGGAGGAGGCTGATCATGGCCACTCGGAAGCTTCTGATGATTCTGATAGTGGGATGGATGATGATGCTATGTTCAGGATTGATACATATCTTGCCCAGATATTCAAAGAAAAGAAAAATCATGCTGGAGGTGAAACTGCACATTCCCAGCTTGTGTTGTTCAAACTTCGAATCCTTTCATTGTTGGAAATTTTCCTTCATGAAAATCCAGGTAAGCCTCAGGTTCTTATGGTCTACTCAAATTTGGCTCAAGCTTTTGTTAACCCTCACACAGCAGAAGTTAGTGAGCAGCTTGCACAGCGTATATGGGGAATATTACAAAAGCAAATATTTAAAGCAAAGGATTATCCAAGAGGTGATGGTGTCCATTTATCCATCATTGAATCTCTGTTGGAAAAAAGTCTAAAACTAGCTTCAAAACCATTTAAAAGACAGAAGTCAAAGCAATCAGCTTCTTGGAACAGACAAAAAATGGTTTCATCTCTTGCCCAAACCTCGACCTTCTGGATTTTGAAGATTATTGATTCAAGAAATTTCTCTCCGTCTGAATTGGAGAAGATTATTCAAATTTTCCGCGACGTATTAATAGGATATTTTGAAAATAAGAAATCTCAAATCAAATCTGGGTTTTTGAAAGAAATATTTCGAAGACGACCATGGATTGGACATGCTGTATTTGGCTTTATTTTGGAGAGGTGTGGAAGTGCCAAGTCAGATTTTCGACGTGTGGAGGCTCTTGATTTGGTAATGGAAATAATGAAGTCGCTGACGTCAGGCAACAGTGATGAACAGACTGCATCGAAAAAGATTCTTAAAAACAATTTGGATAAACTTTGTCATCTAATGAAAGAATTAGCAACTAATGTGCCAAGTAAACCGGCAAGGCGGACAGAGGTACAGAAGTTTTATGTCAAGGTTTTGGAGATCCTGTCTAAGCTTAACCTCACCAAGCAATATTTTAAAGCTTTGGCACCTGATACCGAAGCTGCCCTTCAGGCTCAACTTGGTGAGCAATTCATTAGTTTGAAGAAGCTGGAGAAATAA 3735 0.419 MGSGSKKKSFVAEEQTLATDDSPKPLNKKFKNTAASGDGQQEPSVKPMERKKKRKALDKKRRRTSSQPQPEPVASESKPVPSTAGGALPEFHIGVFKDLAAASEAAREAAAKQMVTELKAVQSAYDTREEKENDEGGFKLEAEKDDGLDNCAPSVRYAVRRLIRGVSSSRECARQGFALGLTVLTGTVHNIKVESFLKLVVNLLEVTSSMKGQEAKDCLLGRLFAYGALARSGRLIMEWNIDKNTPYIREFITVLISLANKKRYLQEPVVLIILDMVEKLPVEALVNHVLEAPGLHEWFEAAIEVGNPDTLFLALKLREKSGMDSSLFGKLLPNPFSSSQLFSADHLSSLSNCLKESTFCQPRLHSVWPVLINILLPNTIVQIEDAASASNSLKKHKKSRKSSSSDEEIAGNLQSFCEIIIEESLLMSSHDRKHLAFDVLFLLLQKLPASLLPVVLSYKVVQCMVDVLSAKNTWLYKVAQHFLKQLSDWVGDDDVRRVAVIVAIQKHSSGKFDSVTRTKHVKDFMSQFKTEPGCMLFVQNLINLFVDEGNAVEEPSDQSQTTDENSEIGSIEDKDSPRSNGNSDFLKSWVIESLPSILKFLKLDDDEKFRVQKEIMKFLAVQGLFTASLGSEVTSFELVEKFRWPKSPTSNSLCKMCINQLQLLLANAQKGEGSRPLANSSEPNDLGSYFMKFFGTFCNIPSVSLFRSLDDVDQKAVKSLQAVETRLSREERSHDCNTDANKLFALRYLLIQLLLQVLLCPGEYAEAASELIICCKKAFSGSDLPESSGEDVEADDAPELMDVLVDTLLSLLPQSSAPMRSSIEQVFKYFCGDITDDGLIRMLRIIKKQIKPARHPDTASADDDEDDDDFINIEDEIDQAETGESDVQTDDSESVVEVEEADHGHSEASDDSDSGMDDDAMFRIDTYLAQIFKEKKNHAGGETAHSQLVLFKLRILSLLEIFLHENPGKPQVLMVYSNLAQAFVNPHTAEVSEQLAQRIWGILQKQIFKAKDYPRGDGVHLSIIESLLEKSLKLASKPFKRQKSKQSASWNRQKMVSSLAQTSTFWILKIIDSRNFSPSELEKIIQIFRDVLIGYFENKKSQIKSGFLKEIFRRRPWIGHAVFGFILERCGSAKSDFRRVEALDLVMEIMKSLTSGNSDEQTASKKILKNNLDKLCHLMKELATNVPSKPARRTEVQKFYVKVLEILSKLNLTKQYFKALAPDTEAALQAQLGEQFISLKKLEK 1244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian6g01913 1244 MobiDBLite consensus disorder prediction 898 917 - -
Vian6g01913 1244 MobiDBLite consensus disorder prediction 553 580 - -
Vian6g01913 1244 MobiDBLite consensus disorder prediction 876 917 - -
Vian6g01913 1244 MobiDBLite consensus disorder prediction 1 86 - -
Vian6g01913 1244 MobiDBLite consensus disorder prediction 1 22 - -
Vian6g01913 1244 PANTHER MYB-BINDING PROTEIN 1A FAMILY MEMBER 77 1241 IPR007015 GO:0003677|GO:0005730|GO:0006355|GO:0008134
Vian6g01913 1244 Coils Coil 1165 1185 - -
Vian6g01913 1244 MobiDBLite consensus disorder prediction 876 897 - -
Vian6g01913 1244 Pfam DNA polymerase phi 157 963 IPR007015 GO:0003677|GO:0005730|GO:0006355|GO:0008134
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian6g01913 Vian-Chr6 36349943 36356696 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian6g01913 K02331 - gmx:100787296 2017.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian6g01913 6 36349943 36356696 Vian6g01913 6 36349943 36356696 ECH