Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian6g01908 ATGGGGAAAAAACGTGTAATGTTGCCAGCCAAGGACGTTGACTTGTCCTCAGTTAAGTACCAACGTGAAATAGTTCAAGCTCCACATTTGACTGGATTTGTGTTTAGATTTTTTGTGAGGATACTAGAAGCTCCGCTGATCGGCCCTATCATAATGGATGTTTTGAAGAAGCAAAATAAAATTGAAGAGATATTGCAGCACACCGTGATACCTGAGGAACCCATGTTTAAGCCTGAATATCCACCTCAAGAAGTGGAGCAGGGTGTTGTTGTCCTTGAAGAAGAAGGGAGACCTGAAGATCGAGTTATGTCTGCCTTGAAATGTCTTCCACATTATGATGTTTCTGAATTATGGGAAAATTCACATGCATCCTTTCGGTACTGGAAAATACGTGACTATGCTCATGCTTATCGATCTAGAAAAGTAACCCCATCCATGGTTGCTGAGCGCATCATCTCCATTATAGAGGAGAATGGAAGAAATAAACCTCCTATACCACTGTTGATATCCTTTGTGGCTGCAGAAGTCCGAGAGCAGGCAGCAGCATCTACACAGAGGTTTGAAGCAGGAAATCCATTATCGATATTGGATGGAATTTTTATGGCCATCAAAGATGACATAGACTGTTATCCTCATCCATCTAAGGGTGCATCAACATGGATGCATGAGGTGCGCACTGTAAAGAAGGATGCAGCTTGTGTTTCTAGACTGCGTAGCTGCGGTGTCATATTCGTAGGGAAAGCCAATATGCATGAGTTTGGAATGGGCACAACAGGAAATAATCCTAATTATGGAACTACAAGAAATCCTCATGCACCTGATAGGTATACTGGTGGATCTTCTTCAGGTCCGGCTGCAATTGTTGCTTCTGGAATATGTTCTGCTGCATTGGGAACTGATGGTGGAGGTTCAATCCGTATTCCTTCTTCCCTTTGTGGTGTCGTGGGATTGAAGACAACATATGGGCGGACAAGCATGGAAGGGTCATTATGTGATTCTGGGACTGTGGAAATTATTGGTCCCATTGCTTCATCAGTGGAGGACGTCATGCTAGTGTATGCGGCAATGTTGGGGGCATCACCTGCAAATAGAATCAGTTTAAGACCGTCACCACCTTGTTTGCCAACTCTGTCATCCAATGACTATTCAAATGCCTTGGGATCTTTAAGAATAGGAAAGTACACTCCGTGGTTTAATGACGTGCATTCAACTGAAATATCTGATAAATGCGAGGACGCACTTAATCTGCTGTCAAAGGAGCATGGTTGTGAAATGATAGAAATCGTTATACCAGAGCTTCTTGAGATGCGAACTGCTCATGTCGTTTCCATTGGCTCTGAATGCTTATGTTCGCTGAATCCTGATTGTGCAGACGGGAAAGGTGCAAAAATGGCATATGATACTCGGACAAGTATGGCACTTTTTCGGTCATTTTCAGCAGCAGATTATATTGCTGCCCAATGTATTAGACGAAGGCATATGTATTACCACATGGAGATTTTCAAGAAAGTGGATGTCATAGTAACTCCGACCACTGGCATGACAGCACCCATAATACCTCCTAGTGCTCTTAAAAGTGGTGAAACAGATATGCAGACTGCAGCTAACCTTATGCAGTTCGTTGTTCCTGCAAATCTTCTGGGGTTCCCTGCCATTTCTGTCCCGATTGGCTACGATAAAGAGGGACTTCCAATAGGTTTGCAAATAATGGGTGGACCATGGGCGGAAGCAACTATTCTGCGGGTAGCCTCTGCAGTTGAGAAACTCTGCGGCGAGTCGAAGAAAAAGCCTGCGTCATACTATGACGTTCTGAAGGCCAACTAA 1824 0.4386 MGKKRVMLPAKDVDLSSVKYQREIVQAPHLTGFVFRFFVRILEAPLIGPIIMDVLKKQNKIEEILQHTVIPEEPMFKPEYPPQEVEQGVVVLEEEGRPEDRVMSALKCLPHYDVSELWENSHASFRYWKIRDYAHAYRSRKVTPSMVAERIISIIEENGRNKPPIPLLISFVAAEVREQAAASTQRFEAGNPLSILDGIFMAIKDDIDCYPHPSKGASTWMHEVRTVKKDAACVSRLRSCGVIFVGKANMHEFGMGTTGNNPNYGTTRNPHAPDRYTGGSSSGPAAIVASGICSAALGTDGGGSIRIPSSLCGVVGLKTTYGRTSMEGSLCDSGTVEIIGPIASSVEDVMLVYAAMLGASPANRISLRPSPPCLPTLSSNDYSNALGSLRIGKYTPWFNDVHSTEISDKCEDALNLLSKEHGCEMIEIVIPELLEMRTAHVVSIGSECLCSLNPDCADGKGAKMAYDTRTSMALFRSFSAADYIAAQCIRRRHMYYHMEIFKKVDVIVTPTTGMTAPIIPPSALKSGETDMQTAANLMQFVVPANLLGFPAISVPIGYDKEGLPIGLQIMGGPWAEATILRVASAVEKLCGESKKKPASYYDVLKAN 607
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian6g01908 607 PANTHER TRANSAMIDASE 120 604 IPR000120 GO:0003824
Vian6g01908 607 SUPERFAMILY Amidase signature (AS) enzymes 103 590 IPR036928 -
Vian6g01908 607 ProSitePatterns Amidases signature. 278 309 IPR020556 -
Vian6g01908 607 Pfam Amidase 169 580 IPR023631 -
Vian6g01908 607 Gene3D Amidase signature (AS) domain 130 590 IPR036928 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian6g01908 Vian-Chr6 36302835 36310962 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian6g01908 1 607 Acyl Lipid Metabolism Gene Families AT5G64440 68.257 0.0 875
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian6g01908 - - gmx:100778732 1094.72
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian6g01908 6 36302835 36310962 Vian6g01908 6 36302835 36310962 ECH