Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian6g01827 ATGTCTTCATATTTTTCAAGCTTTGGTACAAAAATCCCACGTATGGGGAAAGGGTACGATGATGTCTTCACAGTGACCAAGACCAAGCATGCAGTGAAGCAACCAGTTTCATGCTCCAACTATAAAGTGCCCAACAACCTCTCAAAGCAGCACATTGGTTTTGTGTCAAAATTTCCCGTGATGGAGGAGGAGCAGCAGAAAAGGTTGGATGTTTTGCCTGAGTTATCAGAGGATTATTCCAAGGAATTGGAGGTGGCTGTTAGAGCAGTGCAGATGGCGTGTTCCCTCTGCCAGAGAGTGCAGGACAGTATAATTTCCGACACTGGGTCTGTCACCAATCATCGTCAGGTGCAGTCCAAGGATGATAATTCTCCGGTTACAGTAGCAGATTGGAGTGTTCAAGCAATTGTCAGCTGGATGTTGTCAGAATGTTTAGGGAGTCAAAATGTCTCGATTGTTGCTGAAGAAGATGTTCAAAGTCTGTCCAAAGCTAATTCATCTGAACTGTTAGAAGCTGTGGTTGAAACTGTGAACCAATGTCTAGCTGAAGCACCTCGATTTGGAGTTCAGGAGCCAAAATGTGCTCTTTCAACTTCAGATGTTCTTGAAATCATTGGTCGCTGTAGCTCAACGGGGGGTCCCACCGGAAGATTTTGGGTACTGGATCCTGTTGATGGCACATTGGGTTTTGTACGTGGAGATCAATATGCTGTAGCTCTAGCACTCATAGAGGATGGAGAAGTGAAGCTTGGTGTTCTTGGATGTCCTAACTACCCAATGAGGAAGGAATGGTTAAGTTATCATCACCGCTATCATAGGATTATATCCAAGTTGACTCCTCCAACAGCTGAAACTTGGAACAAAGGTTGTGTACTATATGCTAAAAGGGGTAGTGGGAAGGCTTGGATGCAACCGCTGATCCATGTCAATAAGATGTTTGTGTGGCCAAACCATGCAAAACAAGTTTCTGTCTCTCCCATTGACAATCCTGCACTTGCCACCTTCTGTGAACCAGTTGAGAAGGCCAATTCAAGCCATTCTTTTACTGCAGGGCTGGCTCACACTATTGGTCTCAGGAAACAACCGTTGAGGGTATACAGCATGGTAAAGTATGCAGCAATAGCTCGTGGGGATGCTGAGGTTTTCATGAAATTTGCAAGGGCTGGTTACAAGGAGAAAATATGGGATCATGCTGCAGGTGTTATCATCATACAGGAAGCTGGTGGGATGGTAACAGATGCAGGAGGACTTCCCCTAGACTTCTCAAAAGGCTTATATTTAGAAGGCCTTGATCGTGGCATAGTTGCTTGTTCTGGAGCCACACTACATGCAAAGATCATTGATGCAGTTGATGCTAGCTGGGGCTCTTCTGGCCTCTGA 1380 0.4529 MSSYFSSFGTKIPRMGKGYDDVFTVTKTKHAVKQPVSCSNYKVPNNLSKQHIGFVSKFPVMEEEQQKRLDVLPELSEDYSKELEVAVRAVQMACSLCQRVQDSIISDTGSVTNHRQVQSKDDNSPVTVADWSVQAIVSWMLSECLGSQNVSIVAEEDVQSLSKANSSELLEAVVETVNQCLAEAPRFGVQEPKCALSTSDVLEIIGRCSSTGGPTGRFWVLDPVDGTLGFVRGDQYAVALALIEDGEVKLGVLGCPNYPMRKEWLSYHHRYHRIISKLTPPTAETWNKGCVLYAKRGSGKAWMQPLIHVNKMFVWPNHAKQVSVSPIDNPALATFCEPVEKANSSHSFTAGLAHTIGLRKQPLRVYSMVKYAAIARGDAEVFMKFARAGYKEKIWDHAAGVIIIQEAGGMVTDAGGLPLDFSKGLYLEGLDRGIVACSGATLHAKIIDAVDASWGSSGL 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian6g01827 459 Gene3D - 323 453 - -
Vian6g01827 459 PRINTS Inositol monophosphatase superfamily signature 392 416 IPR000760 -
Vian6g01827 459 PRINTS Inositol monophosphatase superfamily signature 219 235 IPR000760 -
Vian6g01827 459 SUPERFAMILY Carbohydrate phosphatase 78 452 - -
Vian6g01827 459 ProSitePatterns Inositol monophosphatase family signature 1. 219 232 IPR020583 -
Vian6g01827 459 Pfam Inositol monophosphatase family 122 453 IPR000760 -
Vian6g01827 459 ProSitePatterns Inositol monophosphatase family signature 2. 395 409 IPR020550 GO:0046854
Vian6g01827 459 CDD PAP_phosphatase 82 450 - -
Vian6g01827 459 PANTHER PHOSPHATASE 71 456 - -
Vian6g01827 459 FunFam PAP-specific phosphatase HAL2-like 323 456 - -
Vian6g01827 459 FunFam PAP-specific phosphatase HAL2-like 77 312 - -
Vian6g01827 459 NCBIfam 3'(2'),5'-bisphosphate nucleotidase 79 457 IPR006239 GO:0006790|GO:0008441
Vian6g01827 459 Gene3D - 78 312 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian6g01827 Vian-Chr6 35697928 35701623 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian6g01827 K01082 - gmx:100776247 821.617
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian6g01827 6 35697928 35701623 Vian6g01827 6 35697928 35701623 ECH
Vian1g03151 1 52564383 52566736 Vian6g01827 6 35697928 35701623 PCT